| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4606 |
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| Symbol | |
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| ID | 7973304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4890967 |
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| End bp | 4891680 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795190 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002946477 |
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| Protein GI | 239817567 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCCC CGAGCCCGCG TACCGGTCTT CTCGTCCATG TGATCGAGGA CGACGAAGAC
ATCCGTGCAG AAACCGTCTT CGCACTCGGA GAGCTCGGCT TCGACGCGGA AGGCTTCGGC
GACGCCCCGT CGTTCTACAA GGCGTTCGCG GTCCAGCCCT GCGACATCGC GGTGGTGGAC
ATCGGCTTGC CAGGCGAGAG CGGCCTCGCG GTCGTTTCAC ATCTGCGCGC AGTGCAGCGA
CGGCTCGGGC TGGTGCTGGT GACCGCGCGG GGCGAGCTCG AGGACCGGCT GCTCGGGCTG
CGCGAAGGTG CAGACGCCTA CCTGGTGAAG CCGGTGAACA TGCTGGAATT GGCCGAGACG
CTGAACGCCG TCGGTCGGCG ACTCACGGTC GCACCGCAGG GGAACGCGGC GACCCTGCCG
GCCGCACCCG CCGACTGGCG CCTGCTCGAG GGCGACTGGA TCCTGGGTGA CCCCGAAGGC
CGGCAGATGG CGCTCACCAC CAGCGAGCGC GCCTTCCTCG CCTGCCTTTT CGGGCAGCGC
GGCACGGCGG CGAGCCGCGA CGACCTGATC CGCGCGCTCG GTGGCGACGT GTTCGATTTC
GACGAGCACC GCATCGATGC AATTGCCAGC CGGCTGCGGC GCAAGGCCGC GAAGCTCGGC
ATGCGCCTGC CGCTGCATTC GGTGCGCGGC ACAGGGTACG TGCTCGCGAT CTGA
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| Protein sequence | MPSPSPRTGL LVHVIEDDED IRAETVFALG ELGFDAEGFG DAPSFYKAFA VQPCDIAVVD
IGLPGESGLA VVSHLRAVQR RLGLVLVTAR GELEDRLLGL REGADAYLVK PVNMLELAET
LNAVGRRLTV APQGNAATLP AAPADWRLLE GDWILGDPEG RQMALTTSER AFLACLFGQR
GTAASRDDLI RALGGDVFDF DEHRIDAIAS RLRRKAAKLG MRLPLHSVRG TGYVLAI
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