Gene Vapar_4599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4599 
Symbol 
ID7973297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4877764 
End bp4878207 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content66% 
IMG OID644795183 
Producthypothetical protein 
Protein accessionYP_002946470 
Protein GI239817560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CCCCGCACGC ATCACCCACC GTTGCCGCCT TCGCGCTCGC CGCCGCGCTG 
CTCGGCACCG CCACCCATGT GGCGGCGCGC GATAACCCTG TAGACCCCGT GAGCAACCCC
GACAAGCTGG ACTACCGCGA CGTCGAGGCG CGCCGCCCCG ACTTCAAGGA GCCCTTTCTG
CGCGACGGCA TCGTGTCGCG GCCCGAGCGC TTTCGCGAGA TCAAGCCCGG GATCAATCAG
GCCCAGGTGC TCGCCGTGCT CGGGCAGGCG CTGAGGCAGC AGCGCGGCGC GCTCGGCACT
GAGTGGGACT ACCAGTTCAA GTTCCAAATG CCGCAATCGG CCAACTACCT CGTATGCCAG
TACAAAGTCG TGTTCGACGA CGGCCAAACC GTGCGCAGCG CCGCGTGGCG CCGTCGGCAA
TGCTTGGATC TGATCCCGCA CTGA
 
Protein sequence
MKKTPHASPT VAAFALAAAL LGTATHVAAR DNPVDPVSNP DKLDYRDVEA RRPDFKEPFL 
RDGIVSRPER FREIKPGINQ AQVLAVLGQA LRQQRGALGT EWDYQFKFQM PQSANYLVCQ
YKVVFDDGQT VRSAAWRRRQ CLDLIPH