Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4599 |
Symbol | |
ID | 7973297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4877764 |
End bp | 4878207 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644795183 |
Product | hypothetical protein |
Protein accession | YP_002946470 |
Protein GI | 239817560 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGA CCCCGCACGC ATCACCCACC GTTGCCGCCT TCGCGCTCGC CGCCGCGCTG CTCGGCACCG CCACCCATGT GGCGGCGCGC GATAACCCTG TAGACCCCGT GAGCAACCCC GACAAGCTGG ACTACCGCGA CGTCGAGGCG CGCCGCCCCG ACTTCAAGGA GCCCTTTCTG CGCGACGGCA TCGTGTCGCG GCCCGAGCGC TTTCGCGAGA TCAAGCCCGG GATCAATCAG GCCCAGGTGC TCGCCGTGCT CGGGCAGGCG CTGAGGCAGC AGCGCGGCGC GCTCGGCACT GAGTGGGACT ACCAGTTCAA GTTCCAAATG CCGCAATCGG CCAACTACCT CGTATGCCAG TACAAAGTCG TGTTCGACGA CGGCCAAACC GTGCGCAGCG CCGCGTGGCG CCGTCGGCAA TGCTTGGATC TGATCCCGCA CTGA
|
Protein sequence | MKKTPHASPT VAAFALAAAL LGTATHVAAR DNPVDPVSNP DKLDYRDVEA RRPDFKEPFL RDGIVSRPER FREIKPGINQ AQVLAVLGQA LRQQRGALGT EWDYQFKFQM PQSANYLVCQ YKVVFDDGQT VRSAAWRRRQ CLDLIPH
|
| |