Gene Vapar_4559 details

Gene Information

• Locus tag: Vapar_4559
• ID: 7973257
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 4812007
• End bp: 4812633
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644795144
• Product: hypothetical protein
• Protein accession: YP_002946431
• Protein GI: 239817521

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGCTG AACAGCCGCC ATTTCCCGAC TACAGCAACT ATCAGCGCCT GCCCAGCATG 
GTGCTGGGCT TCCATGGCTG CGATGAATCC GTGGGCGAGC AGGTGTTGAG CGGCAAGGTG 
CTTCATCTCG CCCGAAGCGT AAACCAGTAT GACTGGCTGG GTGAGGGCAT CTACTTTTGG 
GAAAACGACC CGCTGCGAGC GATGGAGTGG GCTGTAGCTG CAAGGGATGA TCCGCGGCTC 
TCGAAGGGAA AGATCAAGAA GCCGTTCGTC GTAGGCGCGG TGATTGAGCT TGGGCATTGC 
CTCAACATGA CCTCGCGTGT GAGCATTGAG GAAGTGAAAG TCGCTCACCA GATCTTGTTG 
GAGGCCGTCG CGAAGGCAGG GACCGTAATG CCGAAAAACA CGGGAAACGG CTTCTTTCGC 
AGCCTTGACC GCGCCGTGAT CGAGGCGCTT CACGAGTCCA GGAAGACTGC GGAAAAGTCG 
TTGCCCCCAT ACGACACGGT CCGAGCTGCG TTTCGCGAAG GTGGACCGGC TTTCGAAGGC 
TCAGGATTCG ATGAGCGCAG TCACATTCAG ATCGCAGTGC GCGAAAAGGC TCGAATCAAG 
GGTTACTTCC GGCCGATTTG CGAGTAG 

 

Protein sequence

MAAEQPPFPD YSNYQRLPSM VLGFHGCDES VGEQVLSGKV LHLARSVNQY DWLGEGIYFW 
ENDPLRAMEW AVAARDDPRL SKGKIKKPFV VGAVIELGHC LNMTSRVSIE EVKVAHQILL 
EAVAKAGTVM PKNTGNGFFR SLDRAVIEAL HESRKTAEKS LPPYDTVRAA FREGGPAFEG 
SGFDERSHIQ IAVREKARIK GYFRPICE