9 homologs were found in PanDaTox collection
for query gene Vapar_4559 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_4559  hypothetical protein  100 
 
 
208 aa  432  1e-120  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2406  hypothetical protein  41.92 
 
 
199 aa  145  3e-34  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1814  hypothetical protein  37.5 
 
 
208 aa  134  9.999999999999999e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1123  hypothetical protein  38.71 
 
 
178 aa  124  1e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.772439  unclonable  0.00000974902 
 
 
-
 
NC_008752  Aave_2746  hypothetical protein  34.8 
 
 
243 aa  116  1.9999999999999998e-25  Acidovorax citrulli AAC00-1  Bacteria  normal  0.48769  normal 
 
 
-
 
NC_008639  Cpha266_0065  hypothetical protein  32.43 
 
 
175 aa  82  0.000000000000005  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1363  hypothetical protein  37.23 
 
 
102 aa  60.8  0.00000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0671  hypothetical protein  26.88 
 
 
171 aa  56.6  0.0000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  hitchhiker  0.000000213728 
 
 
-
 
NC_013216  Dtox_0013  hypothetical protein  23.63 
 
 
171 aa  47  0.0002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
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