Gene Vapar_4540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4540 
Symbol 
ID7973238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4800822 
End bp4801019 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content63% 
IMG OID644795126 
Producthypothetical protein 
Protein accessionYP_002946413 
Protein GI239817503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATTG TCTTCGGCGG CCTATCGGGC ACCGGTAAGA CTGCCATCGC GCGCAACCTC 
GTCGCTTGCT TGCCCTCTGT CTACTTGCGC ATCGACACCA TCGAGCATGC GCTCCTGAAA
GCGACGGCGC TCGCAAGCAT TGGCCCCGTT GGTTGCCTGC GCGGCCGCCT TGCTGCTGCA
CGCTGGTTTG CATGCTGA
 
Protein sequence
MLIVFGGLSG TGKTAIARNL VACLPSVYLR IDTIEHALLK ATALASIGPV GCLRGRLAAA 
RWFAC