| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4531 |
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| Symbol | |
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| ID | 7973229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4790320 |
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| End bp | 4791189 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795117 |
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| Product | restriction endonuclease |
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| Protein accession | YP_002946404 |
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| Protein GI | 239817494 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1715] Restriction endonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGCC GCAAAAGAAC CAGCCCCGCC GAAGACGTGG TCGACCTGAT TGCCTTGTTG
CCTTGGTATG TGGGGGTCAT CCTGGCTCTT GCCGGGTACC TGCTGCTCCA CCGCATCGCG
ATAGCGCCTC TGCCCAGTGC CCTTGGCTCC GACGCATTGA GCAATGCGAT GGTCGGAGCC
GTGGGGCGCG GCCTGGCGAC TGGCGGGCAG TACATCGTGC CGATCCTCTG CCTCGCCGGC
GCAGCCATCT CTGCTTGGCG CCGTCACGCG AGGCGTTCGT TGATGGACAA CGTGACCCGT
TCAGACGCTC CCGACATCCT TGACGACATG AGCTGGCGAG AGTTCGAGAT GCTGGTGGGC
GAGGGTTTCC GCCTGCAGGG CTACCAGGTC GCGGAGAACT TCGAGCCAGG CCCGGATGAC
GGCATCGATC TCACCCTTCG CAAGAACGGA GAGAAGTACC TGGTGCAATG CAAGCAATGG
CGGGCCCTCA AGGTCGGCGT GCCCGTGGTG CGCGAGCTCT ATGGCGTCAT GGCGGCCAAA
GGGGCCGCCG GTGGATTCGT TGTCACTTCC GGTCGATTTA CGCCGGAGGC CGAAGCGTTC
GCCAGTGGTC GCAACCTTCG CCTGCTCGAC GGCCCGCAGT TGCACCGGTT GTTGAAGCAG
GCCCGAGGCG GCTCTTCGGC CAAGCCCGCC GCCGACGTCA GGGCGACGGA GCAGGCCAGC
AACGCAGCGC CCCAAGCGGC GAAGACAGCC GTCCCGAGCT GCCCCAGGTG CACGCAGCCC
ATGGTGCGAC GTACGGCCAG AAAGGGAGCC AACGCAGGCC AAGAATTCTG GGGGTGCTCG
GACTATCCGC GGTGCCGCGG CACCGCTTGA
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| Protein sequence | MARRKRTSPA EDVVDLIALL PWYVGVILAL AGYLLLHRIA IAPLPSALGS DALSNAMVGA
VGRGLATGGQ YIVPILCLAG AAISAWRRHA RRSLMDNVTR SDAPDILDDM SWREFEMLVG
EGFRLQGYQV AENFEPGPDD GIDLTLRKNG EKYLVQCKQW RALKVGVPVV RELYGVMAAK
GAAGGFVVTS GRFTPEAEAF ASGRNLRLLD GPQLHRLLKQ ARGGSSAKPA ADVRATEQAS
NAAPQAAKTA VPSCPRCTQP MVRRTARKGA NAGQEFWGCS DYPRCRGTA
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