| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4489 |
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| Symbol | |
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| ID | 7972777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4738070 |
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| End bp | 4738678 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644795078 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002946366 |
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| Protein GI | 239817456 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.495414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTGT TGGAAAACCA CCCGGAGAAG AACATCATTC GCGCGCAGCT CCGGCAGAAC
ATCCTTCTCA AGGACCTGAG CGAGAGCGAG CGCGCCGAGC TGGAAACCCA TCTCGTCATC
GTGGACGGCA ACAAGGGCGA TTTCCTGCTG CACCAGGGCG TGCGCGAGAT GGAGCAGTAC
TTCATCCTCG ACGGCATCCT CAAGCGGGTG GTGAGCAACC CCGAGGGCAA GGAAATGATC
CTGCGCTTTG CCGATGCGCA CGACATGGAA ACCAGCTACG CCGCGCTGCG GCTGGGCACG
CCCACGCCCT ACGGCATCGT CTGCGTCACC AAGGCGCGCG TGGCCAGCCT GCCGCTGAAG
GAGTGGATCG CGTTCCTGGA CCGCCACCCC GAGACCAAGG AACTGTTCGA ATACTGCGTG
ATGCGCGGCA TGAGCGAAAT CATGGCGCAC ACCATCACGC TGCATCTGCT CGACGCCCCC
GGCCGCGTGC ACCGCTTCAT GCGCAAGCAC CCCGAGCTGG AAGACCGCAT TCCCAGCAAG
GAGCTGGCGT CGTACCTCAA TCTCTCCGCA GAAACCCTGA GCCGCCTGCG CAAGCGCGGG
AAGATCTAG
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| Protein sequence | MTLLENHPEK NIIRAQLRQN ILLKDLSESE RAELETHLVI VDGNKGDFLL HQGVREMEQY
FILDGILKRV VSNPEGKEMI LRFADAHDME TSYAALRLGT PTPYGIVCVT KARVASLPLK
EWIAFLDRHP ETKELFEYCV MRGMSEIMAH TITLHLLDAP GRVHRFMRKH PELEDRIPSK
ELASYLNLSA ETLSRLRKRG KI
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