| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4463 |
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| Symbol | |
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| ID | 7972751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4709909 |
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| End bp | 4710862 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644795052 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946340 |
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| Protein GI | 239817430 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.599678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCAACG TGCAGCTGCG CCACCTGCGC TGCCTTGTCG CGGTGGCGCA GGAGCGCCAT
CTCGCGCGCG CCGCCGAGCG GCTGTCGCTG AGCCAGCCGG CGGTGTCCAA GACGCTGTCC
GAGCTGGAGG CCATCGTCGG GGCGCGCCTG GTGGAGCGCG GCAATGCCGG GCGGCGCGGG
GTGCAGGGGC TCGCGCCGGC CGGCGAGCAG CTGCTGGCCC ATGCGCTGCG CGTGCTCGAG
GCCATCGACG CCAGCGCGCA GGCGGTGGCG CCGGCCTCGG GCGAGCGCGT GGAGCGGCTG
CGCATCGGCG CGCTGCCGAG CGTGGCGCCG GCGCTGCTGC CGGCGGCACT CGCGCGCTTT
CGCGAGCGCT GGCCGTCGGT GCAGGTGGTG GTGAAGAGCG CGGCCAACCC GGTGCTGCTC
GACGAGCTGC GCGCCGGCGA GCTCGACCTG GTGGCCGGCC GCATGAGCGA TCCGCGGCTG
ATGGGCGGGC TCAGCTTCGA GCTGCTCTAC ACCGAGCCGC TGGTATTTGC CGTGCGCCCC
GGCCATCCGC TGGCGGGCCG GTCGACCCGG GCGGTGTCGG TGCAGGCGGT GCTCGGCTTT
CCGCTCGTGG TGTATGGCGA GGGCACCATC CCGCGCCACA ACACCGAAAG CTTCCTGTCG
GCGCGCGGCC TGGCGCTTCC GCCCCACGCG CTGCAGACGC TCGACGTCGC GGTGGCGCGC
GGCCTGGTGG CGGTGTCCGA CGCGGTCTGG ATCACCCCGC TGGGCGCCGC GCGCGGCGAG
CTGGCCGACC AGCGGCTGGT GCGCCTGCGC ATCGAAACCG CCGGCACCGA CGAGCCCGTG
GGCCTGCTGC TGCGCAGCGA CGCCGAGCCC TCGGCGCTGC GCAGCGCCAT GGCCGCGCTG
CTGCGCGAGG GAGCGAAGCA GCAGGGCGCG CTGCCTTCCC GGAAGGCCGG CTAG
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| Protein sequence | MRNVQLRHLR CLVAVAQERH LARAAERLSL SQPAVSKTLS ELEAIVGARL VERGNAGRRG
VQGLAPAGEQ LLAHALRVLE AIDASAQAVA PASGERVERL RIGALPSVAP ALLPAALARF
RERWPSVQVV VKSAANPVLL DELRAGELDL VAGRMSDPRL MGGLSFELLY TEPLVFAVRP
GHPLAGRSTR AVSVQAVLGF PLVVYGEGTI PRHNTESFLS ARGLALPPHA LQTLDVAVAR
GLVAVSDAVW ITPLGAARGE LADQRLVRLR IETAGTDEPV GLLLRSDAEP SALRSAMAAL
LREGAKQQGA LPSRKAG
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