Gene Vapar_4451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4451 
Symbol 
ID7972739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4692465 
End bp4692884 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content60% 
IMG OID644795040 
Producthypothetical protein 
Protein accessionYP_002946328 
Protein GI239817418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG AGTTCGACAC CGTTCTCCGC GCCCCGTCAG CATGCGGTTG GGTCCTCGCA 
ATCCTCCTAT TACCGTCGGT GGTGATGGCG CAGACCGCAG CACCCTCCGG AGCGATCATT
GCTTCGACGA CGGAAAGCAC GCAGACCACA CCCCAAGCCT CGAGCAATCC GCCTCCGAAT
GGAGCCGCGA ACACAGAGGA AGCCGACGAG CGTGTCTATG CTCCGCTACA GGTAGGTGAT
GCCACCCAAA GTCTGCTCGC ATGGCAACGC AGCGGGGATA TTGCTTCCAA AACATCGCGT
CCCATTGCGG GGCCCATCGC GCAGCGCAGC TATGAGCGCT ACCTGAAAAG TTTCGAGTTC
CCCGTTCCGG AACGTTTGAG TTCGACGGTC AAGACGACCA CAGGTAGCGG CGCCAAGTAG
 
Protein sequence
MNKEFDTVLR APSACGWVLA ILLLPSVVMA QTAAPSGAII ASTTESTQTT PQASSNPPPN 
GAANTEEADE RVYAPLQVGD ATQSLLAWQR SGDIASKTSR PIAGPIAQRS YERYLKSFEF
PVPERLSSTV KTTTGSGAK