Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4451 |
Symbol | |
ID | 7972739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4692465 |
End bp | 4692884 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644795040 |
Product | hypothetical protein |
Protein accession | YP_002946328 |
Protein GI | 239817418 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAG AGTTCGACAC CGTTCTCCGC GCCCCGTCAG CATGCGGTTG GGTCCTCGCA ATCCTCCTAT TACCGTCGGT GGTGATGGCG CAGACCGCAG CACCCTCCGG AGCGATCATT GCTTCGACGA CGGAAAGCAC GCAGACCACA CCCCAAGCCT CGAGCAATCC GCCTCCGAAT GGAGCCGCGA ACACAGAGGA AGCCGACGAG CGTGTCTATG CTCCGCTACA GGTAGGTGAT GCCACCCAAA GTCTGCTCGC ATGGCAACGC AGCGGGGATA TTGCTTCCAA AACATCGCGT CCCATTGCGG GGCCCATCGC GCAGCGCAGC TATGAGCGCT ACCTGAAAAG TTTCGAGTTC CCCGTTCCGG AACGTTTGAG TTCGACGGTC AAGACGACCA CAGGTAGCGG CGCCAAGTAG
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Protein sequence | MNKEFDTVLR APSACGWVLA ILLLPSVVMA QTAAPSGAII ASTTESTQTT PQASSNPPPN GAANTEEADE RVYAPLQVGD ATQSLLAWQR SGDIASKTSR PIAGPIAQRS YERYLKSFEF PVPERLSSTV KTTTGSGAK
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