| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4442 |
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| Symbol | |
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| ID | 7974116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4683753 |
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| End bp | 4683935 |
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| Gene Length | 183 bp |
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| Protein Length | 60 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644795031 |
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| Product | Flp/Fap pilin component |
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| Protein accession | YP_002946319 |
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| Protein GI | 239817409 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3847] Flp pilus assembly protein, pilin Flp |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTCGCT CTATTACTCG TTTTCTGCGC GATGAAGAAG GTGCTACTGC AATTGAATAT
GGAATTATTG CGGGGTTGAT GGCTATTGTT TTGGTGGCGG CGTTTAGCAA GACCACCGGT
ATTGGCCTCG CGCTCACGAA CATGTTTACA GCTATTGCCG GAAAGCTTCC CAGCACACTG
TAA
|
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| Protein sequence | MLRSITRFLR DEEGATAIEY GIIAGLMAIV LVAAFSKTTG IGLALTNMFT AIAGKLPSTL
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