| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4418 |
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| Symbol | |
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| ID | 7974092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4657706 |
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| End bp | 4659349 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795007 |
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| Product | adenylate/guanylate cyclase |
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| Protein accession | YP_002946295 |
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| Protein GI | 239817385 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.9724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGAC GCTCCCCACC CATCGCCCGG CTGCCGAAAC CGCCAACCCG GCGCAACCTC
CGATGGACGA GCGGACTGGT GCTGATGGCC TACGTCACGG CGCATCTGCT GAACCATTCG
CTGGGCATCG CGTCCTTTGC GGCGGCCGAG GCGGTGCTGC GCAATGTGCA GCTTTTCTGG
CACAGCCTGC CGGGCACGCT GCTGCTGTAC GGCGCGGCCG GCGCGCACCT GGCGCTGGCG
GTGGCCGCGC TGTGGGAGCG CCGCACGTTG CGCATGCCGC CGCTCGAGGG CCTGCGCGTG
CTGCTGGGCT TTGCGCTGCC GCTGCTGCTG GCCACCCACC TGACCGCCAT GCGCGGCGCC
TACCTCGCCT ACGGCATCGA GGGTTCCTAT GTGCGCGTGG TCGCCGGCCT GTGGAGCCTG
CCGGGCGCCG GCGCGCAGTT CACGATGCTG CTTGCGGCCT GGACCCATGG CTGCCTCGGC
ATCCACTTCG CGCTACGGGC GCGGCCGGCC TACCGCCGCT TTTCCTACCT GCTGCTGGCC
ATTGCCGTGG TGCTGCCGCT CACGGCAATG ATGGGTTTCG TCTCGATGGG GCGCGAGTTC
CAGTGGACCG GCGTGCCGCC TGCGGTGCTG CCGACTCCGG CCGAGGGCCG TGCGCTCGAC
ACGGCGGAGG GCCGCATCAA GTTCTTCTAT GCGCTCGGCC TCGCTGCCCT GCTGGCGGCC
TATGCGGCGC GCAACTGGCT CGCGCGCCGC GCGCGCGGGG CGTCGGTTGC GCTGCGCTAC
CCCGGCCGCA CGGTGCACGT GCCGCGCGGC TGGAGCGTGC TGGAAGCGAG CCGCTCGCAT
GGCATCGCCC ATCTCTCGGT GTGCGGCGGG CGGGCGCGCT GCTCGACCTG CCGCGTGCGC
GTGCTCGGCC CCGCACAGCA CACGGACCCG CCCGACCGCG ACGAGCAGCG AACGCTCGAC
CGCGTGCGCG CCCCGGGCGG CGTGCGGCTG GCCTGCCAGC TGCGCCCGCG AGGCGACATC
GAGGTCATTC CGCTGTTCGC ACCGGCAAGC CACGGAAGGC AGCCGGCGCC GGCCAGCAGC
TTCGGCCGCG AGCGCGACGT GGCCATCCTG TTCGTGGACC TGCGACGCTG GTCGGGCTTG
TCGGAAGGGC AATGGCCCTT CGACCTGGCC TATGTGCTCG ACCGCTACTT CGCCACCGTG
GGCGCCGCGG TGCGCGAATG CGGCGGCGTG CCGAACCAGT TCATCGGCGA CAGCGTGATG
GCGATCTTCG GGCTCGACAC CGACCTGCCC ACCGCCTGCC GGCAGGCGCT GCGCGCGACC
GAACTCATCG GCCAGCGCAT GGATGCGTGG AGCGAGGGCT TCGAAGCCCA GTTCGGCCAC
CAGCTGGACT TTGGCATGGG CCTGCACGCC GGACGCGCGG CCGTGGGCGA GGTGGGCTAC
CTCGACACCA CCACCTTCAC CGCGATCGGC GAGGTGGTCA ACACCGCGAG CCGGCTGCAG
GACCACGCCA AGACGGCCGC ATCGCGCCTG GTGGTCTCGG TGTTTGCCGC GCAGCAGGCC
GGCTTCGCGC ATGCGGGAGG GCAGGTCGAA ATGCTGGCCG TGCGCGGCCG TTCCGAGCCG
ATTGCGGTGA TCTGCTGCGA CTAG
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| Protein sequence | MDRRSPPIAR LPKPPTRRNL RWTSGLVLMA YVTAHLLNHS LGIASFAAAE AVLRNVQLFW
HSLPGTLLLY GAAGAHLALA VAALWERRTL RMPPLEGLRV LLGFALPLLL ATHLTAMRGA
YLAYGIEGSY VRVVAGLWSL PGAGAQFTML LAAWTHGCLG IHFALRARPA YRRFSYLLLA
IAVVLPLTAM MGFVSMGREF QWTGVPPAVL PTPAEGRALD TAEGRIKFFY ALGLAALLAA
YAARNWLARR ARGASVALRY PGRTVHVPRG WSVLEASRSH GIAHLSVCGG RARCSTCRVR
VLGPAQHTDP PDRDEQRTLD RVRAPGGVRL ACQLRPRGDI EVIPLFAPAS HGRQPAPASS
FGRERDVAIL FVDLRRWSGL SEGQWPFDLA YVLDRYFATV GAAVRECGGV PNQFIGDSVM
AIFGLDTDLP TACRQALRAT ELIGQRMDAW SEGFEAQFGH QLDFGMGLHA GRAAVGEVGY
LDTTTFTAIG EVVNTASRLQ DHAKTAASRL VVSVFAAQQA GFAHAGGQVE MLAVRGRSEP
IAVICCD
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