| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4393 |
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| Symbol | |
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| ID | 7974067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4636649 |
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| End bp | 4637125 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794982 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_002946270 |
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| Protein GI | 239817360 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5488] Integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.427837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGAATT CCGTGTTTCG TTTTGCCACC GTTTCAGGCC AGAACATCCA CTGGTTCCTG
AAGCGCAATT GCTCGGTGAC GCCGAGCCAG CTGGGCTGGC TCTACGCCTC GCTGTGCGTG
GTATCGCTCG GTATCGGCGC GGTCTTCTGG ATGCTCGGTG CGCCGCTGGT TCTGCCTTTT
GCCTGGCTCG AACTGGCCGC GGTGGGTTTC GCGTTCATGC TGTACGCACG GCACGCAACC
GATGGAGAAC GGATTGCGCT GCAGGGCGGC CGGCTGGTGG TGGAGCTCGA GAACGGTGGC
GACTACGAGC GCACGGAATT TCTGCCGCAC CAGGTGCGGA TCGAACCGCA GGCCAGCGAT
CGTTCGCTGA TCGAGGTCTC GGGTCAGGGT CGATCGGTCA GGGTGGGGCG CTATGTACGC
CCGGAGTTGC GAGCCGCATT GGCGCGCGAG ATTCGCATGG CGTTGCGTGG CGCCTGA
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| Protein sequence | MSNSVFRFAT VSGQNIHWFL KRNCSVTPSQ LGWLYASLCV VSLGIGAVFW MLGAPLVLPF
AWLELAAVGF AFMLYARHAT DGERIALQGG RLVVELENGG DYERTEFLPH QVRIEPQASD
RSLIEVSGQG RSVRVGRYVR PELRAALARE IRMALRGA
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