| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4380 |
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| Symbol | |
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| ID | 7974054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4626345 |
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| End bp | 4627184 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794969 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946257 |
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| Protein GI | 239817347 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4335] DNA alkylation repair enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.267721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCCG CCCTTGCCCT GGCCTCCGTC GAGCACCTGA AGGCGCGCCG GGGCGCCTTC
CGCATCGCGC TCATTCCGCC CGAGGTGCTG CGCGCGCTCA ACGACGGGCT GCTCGAGACC
GTCAACCTCA ACGAATTCTT GGCGCTCGAG CTGCCGCGGC TCGCGCGCAG CGTGGCGGCC
CACGTCGGGC TCGATCCGGC CAGCGAGCGG CTGGCCGACA CCATCGCCAT GCTCGGCGCA
TTCAAGCCGA TGCAGCGGCA CGGCCACATT GCCCGCGCGC TCTACGACCT GGCGGCGCTG
CATGCCGAGC GCGATGCCGT CGCCCACCGG CTGGCCACGC ACGCGAGCGA CGTCGCGCGC
TGCTGGGCCG CGCAGTGGAT CACGCTCTCG GGCCTGCCGC TGGCGGCGCA GCTGGAGGCG
GTGCGGCGTT TTGCCGCCGA TCCGCACTTC GGCGTGCGGG AAATCGCCTG GATGGCGGTG
CGCGACGCGG TCATCGCCTC GCTCGACGAA TCGCTCGCGC TGCTGCAGCC GTGGACGGCC
GACGCCGATC CGAATATCCG CCGCTTTGCG AGCGAACTCA CGCGTCCGCG CGGCGTCTGG
TGCGCGCAGA TCGATGCGCT CAAGGCCGAG CCCTGGCGCG CGCTGCCGCT CCTCGCGCCG
CTGCGGGCCG ACGCCAGCCG CTATGTGCAG AATTCGGTGG CCAACTGGCT CAACGACGCG
AGCAAGACCC AGCCCGAGTG GGTCGACCGG CTCTGCGCGC GCTGGCTGGC CGAATCGGAC
ACGCCGGCCA CCCGCTACAT TGCCAGGCGG GCGCTGCGCA CGCTGGCCAA ACAGGCATGA
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| Protein sequence | MDAALALASV EHLKARRGAF RIALIPPEVL RALNDGLLET VNLNEFLALE LPRLARSVAA
HVGLDPASER LADTIAMLGA FKPMQRHGHI ARALYDLAAL HAERDAVAHR LATHASDVAR
CWAAQWITLS GLPLAAQLEA VRRFAADPHF GVREIAWMAV RDAVIASLDE SLALLQPWTA
DADPNIRRFA SELTRPRGVW CAQIDALKAE PWRALPLLAP LRADASRYVQ NSVANWLNDA
SKTQPEWVDR LCARWLAESD TPATRYIARR ALRTLAKQA
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