| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4343 |
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| Symbol | |
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| ID | 7970533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4590382 |
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| End bp | 4590906 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644794931 |
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| Product | putative lipoprotein |
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| Protein accession | YP_002946220 |
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| Protein GI | 239817310 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.22582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGTGC CCGCCCCCCG GCTGGCCGAT GGCGGCCGCC GCGCCCTCCT GCTCGCGGGC
GGGGCCGCGC TGCTCTCGAT GGCCGGCTGC GCCCAGCTGG CGGGCGGCCC CTCCGCGCCC
CGAAGCGCGG ACAGCTGGAG CGGCCGCATG TCGCTGCGCA TCGACAGCCA GCCGGTGCAG
ACCTTCTCGG CATTGTTCGA ATTGCGCGGT TCTCCCGAAG CGGGCGAGCT CTCGCTCACG
AGCCCGATCG GCAGCACCCT GGCCCAACTG CACTGGTCGC CCGGCCAGGC CCTGCTCAAG
AACGGCAGCG AGGTGCGGCG CTTCGAATCT GTCGATGCCT TGATCGAGGC CGCCACCGGC
GCGGCCATAC CGGTCGGCGC GCTGTTCGGC TGGCTCGCGG GCCGCAACGA GCCCGTACCC
GGCTGGCGGC CCGACCTCGC GCAGGTCGCG AACGGCCGAC TGCAGGCCAC CCGCGAGTCT
CCGGGCCCCA CGGCGGACCT GCGCATCGTG TTCGAGCGGT CATGA
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| Protein sequence | MSVPAPRLAD GGRRALLLAG GAALLSMAGC AQLAGGPSAP RSADSWSGRM SLRIDSQPVQ
TFSALFELRG SPEAGELSLT SPIGSTLAQL HWSPGQALLK NGSEVRRFES VDALIEAATG
AAIPVGALFG WLAGRNEPVP GWRPDLAQVA NGRLQATRES PGPTADLRIV FERS
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