| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4334 |
|---|
| Symbol | |
|---|
| ID | 7970522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 4578866 |
|---|
| End bp | 4579459 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644794920 |
|---|
| Product | adenylylsulfate kinase |
|---|
| Protein accession | YP_002946211 |
|---|
| Protein GI | 239817301 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0529] Adenylylsulfate kinase and related kinases |
|---|
| TIGRFAM ID | [TIGR00455] adenylylsulfate kinase (apsK) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.128496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAC AGTTGCAGAA ACCAGACGAT CGTCCTGCTT CGACAACAAC ACTGCGGCCG
CCGCCCGTCA TTTGGCTCAC GGGGCTGTCC GGCGCGGGAA AGTCCACCAT CGCCGCCGCC
TTGCAGCCCT TGCTGCGCGC CAGGGGCGTG GGTGCCGTGC GGCTGGATGG CGACGAGGTC
CGCAAGGGAC TGAACCACGG GCTCGGCTTC AGCGCGGAAG ACCGCCACGA GAACATCCGC
CGCATTGCCC ACATCGCTCG GCTGTTGAAC GAGCAGGGCA TGGTGGCAAT CGTTGCCGTC
GTTTCACCGC TGCAGGCGCT CCGGGATCTC GCGCGCTCGA TCGTCGGCCC TTCGTACCAC
GAGGTCTTCG TGCACGCGCC CCTGGAAGTC TGCGAGCGGC GCGATCCCAA GGGGATGTAT
GCGCGAGCGC GGCAGGGCGC GATCGCGCGC TTCACCGGCG TGTCCGACAT TTTCGAAGCC
CCGGCAAACC CCGCGCTCAC AGTCGACACT TCCAGCTGCG ATGTCTCGGC TGCGGTGCAG
CAGATCATGG CTTCGCTGGA GGGAACGGCG CCAACCCGGA CGCTGCATCA ATGA
|
|---|
| Protein sequence | MPEQLQKPDD RPASTTTLRP PPVIWLTGLS GAGKSTIAAA LQPLLRARGV GAVRLDGDEV
RKGLNHGLGF SAEDRHENIR RIAHIARLLN EQGMVAIVAV VSPLQALRDL ARSIVGPSYH
EVFVHAPLEV CERRDPKGMY ARARQGAIAR FTGVSDIFEA PANPALTVDT SSCDVSAAVQ
QIMASLEGTA PTRTLHQ
|
|---|
| |