Gene Vapar_4329 details

Gene Information

• Locus tag: Vapar_4329
• Symbol: gmk
• ID: 7970517
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 4573965
• End bp: 4574585
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644794915
• Product: guanylate kinase
• Protein accession: YP_002946206
• Protein GI: 239817296
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0194] Guanylate kinase
• TIGRFAM ID: [TIGR03263] guanylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.970942
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTATC CAGGCAACAT CTTTGTCGTG GCGGCACCCA GCGGTGCCGG CAAATCGAGC 
CTGGTCAAGG CGCTCATGGA GCTGGACACG GCCGTCCAGC CCTCGGTTTC CCACACCACC 
CGGCCACCGC GCGGGCAGGA AAAGCACGGC CGGGAGTATT TCTTTACCTC GCCCTCCGAA 
TTCGACGCCA TGATCGCGGC GGATGGGTTC GTGGAGTGGG CCCACGTGCA CGGGCACCGC 
TACGGCACCT CCAAGAAAGC CATCGAGGAG CGCATCGCCC AGGGGGCCGA CGTCATCCTG 
GAAATCGACT TCCAGGGCGC CATCCAGATC CGCAAGACCT TCGCCAACGC CGTGATGATC 
TTCATCCTGC CGCCCAGTTG GGAAGAACTG CGCTCCCGGC TGGAGCGGCG CGGCGAAGAC 
AGCGCGGCCG TCATCGAGCT GCGCCTCAAG AATGCCGCCG AAGAAATGGC CCGGGCAGGG 
GAATTCGACT TCGTTATAAT CAACGAGTTA TTTGAGCGCG CGCTTTTCGA TCTCAAGGCG 
ATCGTCCACG CTCAGCGGCT TCGGTATTCT GCACAGCGCC GCGCACGTGC CGACACATTC 
GCCGCCCTGA ACATCCCCTG A 

 

Protein sequence

MDYPGNIFVV AAPSGAGKSS LVKALMELDT AVQPSVSHTT RPPRGQEKHG REYFFTSPSE 
FDAMIAADGF VEWAHVHGHR YGTSKKAIEE RIAQGADVIL EIDFQGAIQI RKTFANAVMI 
FILPPSWEEL RSRLERRGED SAAVIELRLK NAAEEMARAG EFDFVIINEL FERALFDLKA 
IVHAQRLRYS AQRRARADTF AALNIP