| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4320 |
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| Symbol | |
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| ID | 7970507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4564465 |
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| End bp | 4565370 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644794906 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946198 |
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| Protein GI | 239817288 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGGAT TTAGTCTTCT GAAGACCTTT TTGGAGGTCG CCAACGTCGG CAGCTTCTCG
CGCGCAGCGG GCAAGCTGGG AATCTCCAAG GCCAGCGCAA GCAAGCATGT CGCGACGCTT
GAGGCGCGCT TCAACGTACG GCTTATGAAT CGCTCAACGC GGTCGGTGAC ATTGACCGAT
GCTGGAAGGC TGCTCCAGCT TCGCAGCGCA CCGCTGATGG AGATGGTCGA GTCGACGCAA
AGCGAATTGC AGGCGCATGG TTCACGCCCA AGCGGCCGTC TGCGCGTGGC GGGGCTTCAT
GGGCTCGTGC AAACCGACTT CCCGAGTCTA TTGAGCGAAT TCCTGACTCT CTACCCAGAT
GTCCATATCG ACCTACAGAT CGGCAATCGC GTGGTCGATC TCGTGGAGGA AGGTGTCGAC
ATTGCCTTGA GATTCGGTCG CATCGGCGAC GAGAACCTGA TCGTGCGTCG CCTCCAACGC
GTGGAACTCA CGCTCTGCGC CACGCCCAGT TACTGGGCCA GGCGCGGCAT CCCTCAGATG
CCCGACGACA TGCGATGGCA CGACGTGCTC ACTTACTCGC TATCGGCGGG CGCCCCGCAC
ATTCCGTTCG AAGTTGATGG CGAGCCATAC AACCTCCCGA TCTACGGACG CATGGATGCA
AACGACTCAG GCACTCTCAT CGCCGCGGCA CTGGCCGGCA TCGGCGCAGT GTGTGTGCCG
GCGCTGCTGG CTCAGCCGTA CACAGAACGC GGCAGCCTGG TGCCAGTGCT CAAGGAATTC
ATGCCTCGTG ACATCTGGCT CTACGCGGTG TACACGCAGC GCCGGCACAA CAGCGCAGCC
CTGCGTGCAC TGCTGAAGTT GCTTGAAGCG CGCATGGGAG GCGGCGCACC CGACCATCCG
ACTTAG
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| Protein sequence | MDGFSLLKTF LEVANVGSFS RAAGKLGISK ASASKHVATL EARFNVRLMN RSTRSVTLTD
AGRLLQLRSA PLMEMVESTQ SELQAHGSRP SGRLRVAGLH GLVQTDFPSL LSEFLTLYPD
VHIDLQIGNR VVDLVEEGVD IALRFGRIGD ENLIVRRLQR VELTLCATPS YWARRGIPQM
PDDMRWHDVL TYSLSAGAPH IPFEVDGEPY NLPIYGRMDA NDSGTLIAAA LAGIGAVCVP
ALLAQPYTER GSLVPVLKEF MPRDIWLYAV YTQRRHNSAA LRALLKLLEA RMGGGAPDHP
T
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