| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4313 |
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| Symbol | |
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| ID | 7970500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4555913 |
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| End bp | 4556707 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794899 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002946191 |
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| Protein GI | 239817281 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAGCG CAGAACTCGG TGAGCCAGGT CTGGACTACG AACCTTCGGT ACCTGTGATG
GCACTGCGCG TCGATGTGGC GGCGCGCGAG CGAGAAATCC CTGTGCACGA GCACCGGTCC
GGCCAGCTCG TGATCGCGCT GCGCGGTGCC GTTTCCTGCG AGGTGCCCGG CGCGCTGTGG
ATGGTCCCAC CCCAGGCGGG CGTGTGGATT CCGGGCGGCA CGCCGCACAG CAACCGAGGA
ACGGCGAACG CGCAGATCTT CTACCTCTTC GTCGAACCTG GTGCTGCCCC ATTGCCGGAT
CGTTGCTGCA CCTTGCGCAT CAGCCCGATG CTCAGCGAGA TGATTCAGTA CCTCGCAGGA
TTGCCGCCCT TGTACGAAGC CGGCGGGTCG ACCGATCGAC TGGCGCAGGT GCTGCTCGAC
CAGCTGTGCG CGATGCCCAC GGAGGAAATG TTCCTGCCGA TGCCTGAGGA CGCAAGGCTC
AGAAAGATCT CAACGGCGAT GATGCGCGAT CCCTCCGATC GCAGGACCCA GACGAACTGG
GCAAGCGAAC TGGGCATGAG CGATCGAACG TTGAATCGAC TGTGCACCTC GCTGACGGGC
CTGAGCTTTG GCCGCTGGCG GCGCCAGCTG CAGATGATCG TGGCACTTCG CGAGCTGTCC
GGTGGCGCGA CCGTCCAGCA AGTCGCCTAC GAGCTGGGCT ATGAATCGCC CTCTGCCTTC
AACACGATGT TCAAGAAGGC TTTTGGAAAG CCGCCCGCCA CCTACATCAA CGACCGCTTT
CGAGTCGATG GATGA
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| Protein sequence | MRSAELGEPG LDYEPSVPVM ALRVDVAARE REIPVHEHRS GQLVIALRGA VSCEVPGALW
MVPPQAGVWI PGGTPHSNRG TANAQIFYLF VEPGAAPLPD RCCTLRISPM LSEMIQYLAG
LPPLYEAGGS TDRLAQVLLD QLCAMPTEEM FLPMPEDARL RKISTAMMRD PSDRRTQTNW
ASELGMSDRT LNRLCTSLTG LSFGRWRRQL QMIVALRELS GGATVQQVAY ELGYESPSAF
NTMFKKAFGK PPATYINDRF RVDG
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