| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4301 |
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| Symbol | |
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| ID | 7970488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4544583 |
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| End bp | 4545455 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794887 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946179 |
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| Protein GI | 239817269 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAGTC TCCGTGCGCT CCTGGGCCCG CTGCGCGTGT TCGATGCAGT GTGCCGCGCC
AAAGGGATCA CACGCGCCGC CCAGGTGCTT CATGTGACGC CCGGTGCAGT CAGCCAGCAA
GTCAAGCAGC TGGAGGTCGG GCTCGGAGCG CAGCTGTTTC AGAAATCCGG CCGCGAGATC
GAGCTCACCG CGGTGGGCAA ACGACTGGCC CACCGCGTTT CGGATGCTTT CGATCGCCTG
AACGATGCGC TCAATGACGT GGTCGATATC CAGCTGGACA AGCGGCTGCG CCTGAAGGTG
ACGCCTAGCC TGGCCATCCG ATGGTTGGTG CCTCGCCTGC GCGGCTTCTA CGCGCAACAC
CCCGACATTG ACCTCGAGAT TTCGACCATT GCAATGGCCG ACGACATCCG GCTCGAGGGC
GCTGACTGCG CGATCCGGCA TGGCATGGGA GAGTGGGCCG ATGTCGAGCT GGACCACCTC
TTCGACGACG AATTTCTTCC TGTCTGCGCA CCCCACCTGG CCAGGCATTT GAAGGCACCT
CAAGACCTGC TGCAAGCCAA CCTGCTGCAC TCGATGATGC GGCCGGAAGC CTGGTCGCTC
TGGTTCAGTT CGGCCGAACT TGTGGATTCC CCGCGTCTGC ATGGAATCAC CTTGGCGAAT
GCTGCGCTGT GCTACCAGGC GGCGGCTGAT GGATTGGGGA TTGCCATCGC CCAGCGCGCC
TACGTGGATG ACGACCTGCG CAGCGGGCGG CTCGTCATCG CCGTGGATCA CGTGGCCACA
ACGGAGTCCG GGTACTACCT GGTCTGCGAT CCGCTGAAAG CGGCAGAGGC TCCCGTGAAG
CTCTTCAGAG ATTGGATCCG TTCTGTCCGG TAG
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| Protein sequence | MHSLRALLGP LRVFDAVCRA KGITRAAQVL HVTPGAVSQQ VKQLEVGLGA QLFQKSGREI
ELTAVGKRLA HRVSDAFDRL NDALNDVVDI QLDKRLRLKV TPSLAIRWLV PRLRGFYAQH
PDIDLEISTI AMADDIRLEG ADCAIRHGMG EWADVELDHL FDDEFLPVCA PHLARHLKAP
QDLLQANLLH SMMRPEAWSL WFSSAELVDS PRLHGITLAN AALCYQAAAD GLGIAIAQRA
YVDDDLRSGR LVIAVDHVAT TESGYYLVCD PLKAAEAPVK LFRDWIRSVR
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