| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4297 |
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| Symbol | |
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| ID | 7970484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4540802 |
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| End bp | 4541815 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794883 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002946175 |
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| Protein GI | 239817265 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGG TCAGTGCGCC CATGACGGTG ACCGCACCGT CTCGCGCCCG CCCGTGGATG
CAGCTGCGCG GAGAGCTCGT GCTGATGCTG GTGGGGCTGC TGGCCTTCGT GCTGTTCCCG
CAGGACCTCG GCTTGCTCAC CAACATGGCG ACCATGTCCA TCTTCGCGCT GTCGCTAAGC
CTCGTGCTGG GACAGGCCGG CATTGCGACC TTGGGCCAGG CCGCGTTGTA CGGCAGCGGC
GCCTACGTCG CGGGCTGGAC GGCGCTGTAT CTGACGGCAG ATCCGATTGT GGGCCTGCTG
CTGGGCGGGC TGGGCGGCGG CGTGATCGCG CTGCTGAGCG GCGCCGTCAT GCTGCGGTCG
ACCAAACTGA CGCTGGTCAT GCTGACCATC GCGGTCGCCC AGCTGCTGCT TGAACTGGCC
AATTGGGCGA GGTGGCTCAC GGGTGGCGAC GATGGACTTG CCGGCTTCAA CATCGGTCCC
TTGCTGGGCA TCTGGGAATT CAACTTCCTG AGTTACACGG GCTACTTCTA TGCTCTGGGC
GCACTTGTGC TTGTGTACTT CCTGCTGAGG AACCTTGTGG AGTCGCCGTT CGGTCTCACG
GCCCGGGCGA TCCGCCAGGA TCCCGGACGC GTTCAGGCGC TCGGAGGGCG CGTCTATTTG
CACTTGCTGG CCGTCTACAC GGTCGGCGGC ATCGTGGCCG GGCTGGCTGG CGCATTGACG
GCACAGACCA GCAAAGTCGC CAACCTCTTC ATGCTGGATT TCACGACATC GGCCGGTGTC
GTGGTCATGA TCGTTCTGGG TGGAACGCGC CGTCTGTCGG GCGCCGTGCT CGGCACTGTC
GCGTACATGA CCATCCATCA CATCGCATCG ACCTTGAACC CCTATCACTG GTTGTTCTTC
ATTGGGTCGA TGCTGATCGT CGTACTCATC GTCCTGCCCG AAGGCTTGAT CGGACTTGTG
GACCGCACTG TGGCGTACAC CAAGCGGCCT GGCCGCAGTG GGGTGGCTCG ATGA
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| Protein sequence | MNAVSAPMTV TAPSRARPWM QLRGELVLML VGLLAFVLFP QDLGLLTNMA TMSIFALSLS
LVLGQAGIAT LGQAALYGSG AYVAGWTALY LTADPIVGLL LGGLGGGVIA LLSGAVMLRS
TKLTLVMLTI AVAQLLLELA NWARWLTGGD DGLAGFNIGP LLGIWEFNFL SYTGYFYALG
ALVLVYFLLR NLVESPFGLT ARAIRQDPGR VQALGGRVYL HLLAVYTVGG IVAGLAGALT
AQTSKVANLF MLDFTTSAGV VVMIVLGGTR RLSGAVLGTV AYMTIHHIAS TLNPYHWLFF
IGSMLIVVLI VLPEGLIGLV DRTVAYTKRP GRSGVAR
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