| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4279 |
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| Symbol | |
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| ID | 7971363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4520677 |
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| End bp | 4521879 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794866 |
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| Product | beta-lactamase |
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| Protein accession | YP_002946158 |
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| Protein GI | 239817248 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATGT CCCATGTCCG CCTTGCGGCC ATCGCGCTGG CCCTGAACCT GGCCTCGGCC
GGTGCCGCGC TGGCCCAATC CGTGGCCCCG GCCGATGACG CCGGGCCCGC CATCGCCGCC
GCGGTGCCCG AGGCCGTCGG CGTCGATTCG CGCCCGCTGG TGCGGCTGTC CGAGTGGATC
CGCAAGGAAG ATCTCGACGT GCGCAGCTTC CTCGTCGTCA AGGACGGCAA GCTGGTCTTC
GAGCGCTACA GCCGGGGGCT CGGCCGCGAC CACAACTACG AGCTCTACTC GATCACCAAG
AACGTCACCG CGCTGGCTGC GGGCGTGCTG ATCGACGAAG GCCGCAGCCG CCTCGACGAG
AAGGTGGCGC CCGTGCTGGC CAAGGCGCGC CCGGACCTGA AGGCGGCACT CGCGGACAAG
CAGGCCATCG AGCTGCGGCA CGTGATGTCG ATGTCGACCG GCCTGTTCTA CGACTTCAAG
CCGACCGACG ACCCGATCTA CTACGGCGCG CCCGACCGCC TGAAGCTCGC CGCCGAGACC
ACGCCCAGGC GCCCGCCCGG CGAGGCCTTC GACTACACCG ACGTCAACCC GATCCTTGCG
AGCGCAACGC TGGGCGCCGA TGCCGGCATG CCGCTGCAGG CCTTTGCCGA GCAGAAGATC
TTCAAGCCAA TGGGCATGGC GCACTACGCC TGGGAGCGCG CCGACGGCAA GGGGCTGGTG
TCGGCCGGCT GGGGCCTGCG GCTGCGCGCG ATCGACATGG CCAAGCTCGG CATGCTGGTG
CTCTCGGGCG GGCGCTGGAA CGGCCGGCAG ATCGTGTCGC AGGCGTGGAT GCGGACCATG
ACCGCGCCGT CGTCCGCGCC GTGGTACGGC CAGTTCTGGT GGATCAACGA CATCGTCGCC
ACCGAGCCCG AAGTGCATGC CATGGGCTTC AAGGGCCAGT TCATCGTGGC GCTGCCCGAG
CGCAATGCGG TGGTCGTGAT GACCAGCATG CTGCCCATCG AAGGCGGCCT GCGCGAGTCG
AAGAACGTGC TGGCGATCCG CAAGATGGTC AATGACTTCG TGCTGCCCGC ACTCGACAAT
CCCTCGCATG CCGGGCCGAC GCCCGCCCGC CGCAAGGCCC TGGCGCACGA GCTTGACCTG
GCCTCGCGCC ACCAGGGAAA GCCGGGCGCA CCGGCCGACC CGACCGACAC TCCTCGCCTC
TGA
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| Protein sequence | MSMSHVRLAA IALALNLASA GAALAQSVAP ADDAGPAIAA AVPEAVGVDS RPLVRLSEWI
RKEDLDVRSF LVVKDGKLVF ERYSRGLGRD HNYELYSITK NVTALAAGVL IDEGRSRLDE
KVAPVLAKAR PDLKAALADK QAIELRHVMS MSTGLFYDFK PTDDPIYYGA PDRLKLAAET
TPRRPPGEAF DYTDVNPILA SATLGADAGM PLQAFAEQKI FKPMGMAHYA WERADGKGLV
SAGWGLRLRA IDMAKLGMLV LSGGRWNGRQ IVSQAWMRTM TAPSSAPWYG QFWWINDIVA
TEPEVHAMGF KGQFIVALPE RNAVVVMTSM LPIEGGLRES KNVLAIRKMV NDFVLPALDN
PSHAGPTPAR RKALAHELDL ASRHQGKPGA PADPTDTPRL
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