| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4268 |
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| Symbol | |
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| ID | 7971352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4508712 |
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| End bp | 4510061 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794855 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946147 |
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| Protein GI | 239817237 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.396774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGTCT TCCCGTTTTC CCGGCCCCTG GCGTCCTGCC TTGCCGCATC GATGGCACTG
GCCTTGCCGC TGTCCGCAGC GCTCGCCCAG CCGTCTGCGG GCCGGCCGCC CGGCCCGCAA
GCCGCCAGCG CCACCCAGCA AACGCTGGCG CGGCAAAGCT GCGAGGGGCT GCGGCGCGCG
GTGGCGGAGG ACCAGAAGGG CGCGGCTTCC GGACCGCTGT TCCTGGCCAG CTACCGCGTC
GCCGACCCGA AGCAGGGCAC GCCGCTGGAA CCTGCATTGG CGGGCGCCGC CTTCACCTAT
GACAACGCGC TCGCGGGCAT CGCGCTCCTG GCCTGCGGCG ACGCAGCCTC GGCCCGGCGC
ATCGGCGACG CGGTGGTGCG CGCGATGGAG CGCGACCCGA ACACGGCCGA CGGGCGCGTT
CGCAACGCCT ACCGCGCCGG CCCGATGACC GAGGAAAAGG CCGCGCTGCC GGGGCGTTGG
GATGCGGCCA AGAACCAGTG GATCGCCGAT GCCTACCAGG TGAGCACGGC CACCGGCAAC
GTGGCCTGGG CCGCCTTGCT GCTGCTGAAC CTGAACGAGG CCGAGCCTTC GCCCGCCTAC
CTGGCGGGCG CGCGCCGCCT GCTGGGCTGG ATCGAGCAGC GCACCCGCGC GCGCAACGCC
CCCGACGGCT ACAACGGCGG CTGGTACGGC TGGGACAACG CGCAGCGCGC CCAGACCTGG
AAATCCACCG AGCACAACAT CGACATCGCG GTGGCGGCCG CCTGGGCGGC GAAGAGCGCC
GGCGGCGAGG CCGAAGCCGA ACGCCGGCAG GCGCGCACCG CGCTCGAATT CGTCAACCGC
ATGTGGAACG CATCGGAGCA GCGCTTCAAC ATCGGCACCA AGGAAGACGG CGCCACCATT
GCCACGGATG GCTCCGGCCT GGATGCCCAG CTGTGGCCGC TGCTGGCGGC GCCCGAGGGT
TCCTGCCCCT GGATGCGGGG GCTCGACTGG GTGGAGAAGC ACCATCGCTT CGGCGAAGGC
TACGGCTTCT CGCGCAGCCC CGACGGCATC TGGACCGAGG GCACCGCCCA GGCCGCCGCC
ACGCTGGTGG CGCGCAAGGG CGCGGCGCCC GAAGCCCTGT GGCAGCTGAT GGCCTCGCAG
CGCGCCGGCA ACGGCCTTTA CTACGCCACC CCCAGTGCCC GCATATCGAC GGGGCTGGCC
ATCGGCCCCG ACTCGACGGG GGCCGACTTC TTCTACTACC GCTGGCCACA CTTGGGCGCG
ACTGCCTGGA TCGCGCTGGC CGCCACGGGG TTCAACCCCT TCACCGGCAA AACCGCCGCA
ACAGGAGCTA CGTCACCATG TCCCACCTGA
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| Protein sequence | MSVFPFSRPL ASCLAASMAL ALPLSAALAQ PSAGRPPGPQ AASATQQTLA RQSCEGLRRA
VAEDQKGAAS GPLFLASYRV ADPKQGTPLE PALAGAAFTY DNALAGIALL ACGDAASARR
IGDAVVRAME RDPNTADGRV RNAYRAGPMT EEKAALPGRW DAAKNQWIAD AYQVSTATGN
VAWAALLLLN LNEAEPSPAY LAGARRLLGW IEQRTRARNA PDGYNGGWYG WDNAQRAQTW
KSTEHNIDIA VAAAWAAKSA GGEAEAERRQ ARTALEFVNR MWNASEQRFN IGTKEDGATI
ATDGSGLDAQ LWPLLAAPEG SCPWMRGLDW VEKHHRFGEG YGFSRSPDGI WTEGTAQAAA
TLVARKGAAP EALWQLMASQ RAGNGLYYAT PSARISTGLA IGPDSTGADF FYYRWPHLGA
TAWIALAATG FNPFTGKTAA TGATSPCPT
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