Gene Vapar_4223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4223 
Symbol 
ID7971307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp4463940 
End bp4464545 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content73% 
IMG OID644794810 
Productdephospho-CoA kinase 
Protein accessionYP_002946102 
Protein GI239817192 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0237] Dephospho-CoA kinase 
TIGRFAM ID[TIGR00152] dephospho-CoA kinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.254941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCGCA TCGGCCTCAC GGGCGGCATC GGAAGCGGCA AGAGCACGGT CGCGGCCCTG 
CTGGTCGCCG AAGGCGCCGT GCTGGTCGAC ACCGACGCCA TCGCGCGCCG CATCGCGCAG 
CCCGCGGGCA TCGCGATGCC CGCCCTCGAG GCCGCCTTCG GCCGCGGCGT CATCGCAGCG 
GACGGCGGAC TCGACCGCGC GGCGATGCGG CAGCTCGTGT TCGCCGACCA CAGCGCCAAA 
AAGCGCCTCG AATCGATCCT GCATCCGCTG ATCGGTGCCG AGACCGAACG CATGGCCTCC 
AACGCCGGCC CCGACGCGGT GGTGGTCTTC GACGTGCCGC TCTTGGTCGA ATCCGGCCGC 
TGGCGGGCCC GGGTCGACCG CGTGCTGGTG GTCGATGCCA CCGAGCAAAC GCAGCTGCGG 
CGCGTGGTGG CGCGCTCCGG CTGGACGCCC GAGGCGGTGC GCGCGGTGAT CGCCCAGCAG 
GCGCCGCGCG GGCTGCGCAG GGCGGCCGCG GACGCGGTCA TTTTCAACGA GTCGCTCTCG 
CTGGAGGAAC TCGCTGCAGA GGTCCGGAGT CTCTGGAAGC GGTGGGTTCC GCCCGGCACG 
CGATAA
 
Protein sequence
MRRIGLTGGI GSGKSTVAAL LVAEGAVLVD TDAIARRIAQ PAGIAMPALE AAFGRGVIAA 
DGGLDRAAMR QLVFADHSAK KRLESILHPL IGAETERMAS NAGPDAVVVF DVPLLVESGR 
WRARVDRVLV VDATEQTQLR RVVARSGWTP EAVRAVIAQQ APRGLRRAAA DAVIFNESLS 
LEELAAEVRS LWKRWVPPGT R