| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4209 |
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| Symbol | |
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| ID | 7971292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4449864 |
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| End bp | 4450364 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794795 |
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| Product | Cupin 2 conserved barrel domain protein |
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| Protein accession | YP_002946088 |
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| Protein GI | 239817178 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4101] Predicted mannose-6-phosphate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCACG ACCACGGCCA CGGCCACGAG GGCAAGGCCG CACCGGCCTG GAAGCACGAC
GGCGTGCGCG TGATCGCGGC CAACCAGCTC GACGCCAACA CCGCCCAGAC GCCCGGCATG
AACCGCGCCG CGGCCATCAA CTTTGCGCGC GTCGGCGCGC AAAAGCTGTG GGCCGGCACC
GTCACCATCC ATGCCGACGC CAAGACCGGC GCCCACCATC ACGGGCACCT CGAATCGGTG
ATCTACGTGG TGCGCGGCCG GGCCCGCATG CGCTGGGGCG AGAAGCTCGA GTTCACGGCC
GAGGCCGGCC CGGGCGACTT CATCTACGTG CCGCCCTACG TGCCGCACCA GGAAATCAAC
GCCAGCGCCA CCGAGCCGCT CGAATGCGTG CTGTGCCGCA GCGACGGCGA GGCGGTGGCG
ATCAATCTCG ATATCGAGCC GGTAGAAAAA CCCGAATCGG TCCTGTGGGT CGACCCGACC
CACCCGCACG GCGGGGTCTA G
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| Protein sequence | MSHDHGHGHE GKAAPAWKHD GVRVIAANQL DANTAQTPGM NRAAAINFAR VGAQKLWAGT
VTIHADAKTG AHHHGHLESV IYVVRGRARM RWGEKLEFTA EAGPGDFIYV PPYVPHQEIN
ASATEPLECV LCRSDGEAVA INLDIEPVEK PESVLWVDPT HPHGGV
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