| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4074 |
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| Symbol | |
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| ID | 7974396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4318729 |
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| End bp | 4319655 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794660 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945953 |
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| Protein GI | 239817043 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTACC TGGTCGCGCT CAGCGAGCAC AAGCATTTCG GACGCGCGGC GCAGGCCTGC
CACATCACTC AGCCGGCGCT GTCGAATGCG CTGCGCTCGC TCGAAAGCGA ATTTGGCGTG
GTCATCGTCA AGCGGGCGCG CGTCTACGTG GGCCTCACGC ACGAAGGCGA GCGGGTGCTG
GCCACGGCGC AGCGCATGCT GCGCGACAAC GAGGTGCTGC AGCAGGAGCT GCGCAGCGAA
GAGGGCCATC CGCGCGGGCG GCTGCGCATG GCGGCCGTGC CCACCGCCAT TCCGATGCTG
TCGCGCTTTG CCGCGATGCT GCACGAGATG CATCCGGGCA TCGTGCCGGC GGTGCTGTCG
ATGAGTTCGC AAGAGCTGGA AACGGGGCTC GAAAGCCTCT CGGTCGACCT CGCGCTCGGC
TACACCGAGC GCATGCATTT GCCGGGCATC AAGCTCACGG CATGGCCGCA GAGCGTGGAG
CACTACTTCC TGCTGCGGCG CGCGGCCAAG CCCTCGGCCG ACCGGCTGCG CATCGGCCAG
CCGATCTCGT GGGCCGAGGC CGGCCAGCGG CCGCTGTGCC TGCTCACGCC CGACATGCAC
AACCGCTCCA TCATCGACCA GGCGCTGCGC GACGCCGGCA TTGCGCTGGA GCCGGCCATC
GAAACCAACT CGGTACTTAC CCTTGCATTG GCCGTGCTCG CGGGCACCGT GAGCAGCGTG
CTGCCGGGGT CGATGGTCGC GGCCGTGCGC AGTTACCGCG AGCTGGAGGC CTTGCCGCTG
GTCGCCCCCG AGGTCAAGAC GCCGCTGGGC TTCATGACCC AGACCGGCGT GCGCCCCTCG
CGCGCGCTCG ATGCCGCCCT GGTGTTCCTG CAGACGCCGG CATGGCGCGA GCAGGTGCGG
CTGCACAGCG GCGCGCTCGG CGAATAG
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| Protein sequence | MRYLVALSEH KHFGRAAQAC HITQPALSNA LRSLESEFGV VIVKRARVYV GLTHEGERVL
ATAQRMLRDN EVLQQELRSE EGHPRGRLRM AAVPTAIPML SRFAAMLHEM HPGIVPAVLS
MSSQELETGL ESLSVDLALG YTERMHLPGI KLTAWPQSVE HYFLLRRAAK PSADRLRIGQ
PISWAEAGQR PLCLLTPDMH NRSIIDQALR DAGIALEPAI ETNSVLTLAL AVLAGTVSSV
LPGSMVAAVR SYRELEALPL VAPEVKTPLG FMTQTGVRPS RALDAALVFL QTPAWREQVR
LHSGALGE
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