| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4068 |
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| Symbol | |
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| ID | 7974390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4310976 |
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| End bp | 4311770 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794654 |
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| Product | ABC transporter related |
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| Protein accession | YP_002945947 |
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| Protein GI | 239817037 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACG TCGACCTGAA GCTCACCGTC ACCGATGGCG CCCGGCGCTT CGACCTAGCG
GCGCGCTTCG CGACCGACGT GCCTTTTGCC GCGCTCTACG GCCCCTCGGG CGCGGGCAAG
ACGCTCACGC TGCAGGCCAT CGCGGGGCTG CTGCATCCGT CCGCGGGCCA TGTGCGGCTG
GACGGCCGCA CGCTCTACGA CTCGGCCCGC GGCATCGACG TGCCGGCGCC GGCGCGGCGC
ATCGGCTACC TGTTCCAGAA CTACGCGCTG TTCCCGCACC TGTCGGTGCG CGAGAACGTG
GCCTTCGGCC TGACCGCCTG GCACCGGCGC CGGCTGCCGC CGCGCGAGGC CGAGCGGGTG
CAGGCGCTGC TCGAAGGCTT CGGCCTGGCG GCGCTGGCCG ACAGCCGGCC GCAGAAGCTC
TCGGGCGGCC AGCAGCAGCG CGTGGCGCTG GCCCGCGCGC TGGCCTGCCA GCCGCAGGTG
CTGCTGCTCG ACGAGCCCTT TGCCGCGCTC AACCCCATGC TGCGCAGCGA ACTGCGCCAG
GAACTCGCGC AGGTGCGCCG CCAGTGGGGC ATTCCGGTGC TGATGATCAC GCACGACATC
GAGGACGTGC TGGCGCTGGC CGACGTGGCC TTCGTCTACA GCGACGGCCA GGTGGTGCGC
GAGATCGACC TGCACAACGC GCAAAGCCGC GATTTCGCGC TGCGCGAGGC GGGCGGCGTG
CCGGCCGCCG AGGCTTCGCC GCTGCACCGC AAGCTGCGCG GCCTGCTGCT GCAGGACGCA
ACCGGCCGCG GATGA
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| Protein sequence | MIDVDLKLTV TDGARRFDLA ARFATDVPFA ALYGPSGAGK TLTLQAIAGL LHPSAGHVRL
DGRTLYDSAR GIDVPAPARR IGYLFQNYAL FPHLSVRENV AFGLTAWHRR RLPPREAERV
QALLEGFGLA ALADSRPQKL SGGQQQRVAL ARALACQPQV LLLDEPFAAL NPMLRSELRQ
ELAQVRRQWG IPVLMITHDI EDVLALADVA FVYSDGQVVR EIDLHNAQSR DFALREAGGV
PAAEASPLHR KLRGLLLQDA TGRG
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