Gene Vapar_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4013 
Symbol 
ID7974578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp4257887 
End bp4258579 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content63% 
IMG OID644794599 
Producthypothetical protein 
Protein accessionYP_002945893 
Protein GI239816983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.170301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAAT GTCTTTGGAC CGCCATTACC GCCTTGGCGC TGCTCATCAC CGCATCGGCA 
GCCGCTTCAG CCAATCCGCT TCCGATCAAC CAGTTGCCGA TGTACGGCGG TCGCGCCAAG 
ACGGAAGAGA TGAAAAGCGC CGATGCCGAC TTCATTGCGT CGATGGAGAA GAGTGGCCTC 
TCTCGCGCCG ACGGAGCGAA GCAGGTGCTC GGCCGGGGTT GGGCAGCCTG GGCCAAGGGA 
GACACGACGA CGGCGATGGC GCGCTTCAAC CAGGCGTGGC TGCTGGACCC CGAGAACGGC 
AACGTGTATC ACGGCTTCGC GCTGATCACG GCGGGTCGCG ACGGCACGGC ATCGGAGGTG 
GAGCGCTTCT TCCGATTGGC AACATCGAGG CCGAAGGTCG ATGCCGAGGC CTTTGTCGAC 
TACGGCAAGT TTCTCTGGAT GGTGAAGCGG CTCGATGAAA GTCAGGCCGA GCTGAACAAG 
GCGCTCCGGA TCTCGGCGAC CGCGCGCAAT GCGCGCTCCC ACGTGGCTTT CACGTACTAC 
CTGAAGAACG ACTTCACAAA TGCCTGTACA TGGGCATGGG AAGCAAGGAA CAACGGCGAC 
GAGCTCGAGA GAGGTTTTCT CGAGGAAATG TGCAACCGCG CCGGCAAGCC GGACGAAGGG 
AAGCCCGCTT CCCCGGCCGG CCCACCCGCC TGA
 
Protein sequence
MPKCLWTAIT ALALLITASA AASANPLPIN QLPMYGGRAK TEEMKSADAD FIASMEKSGL 
SRADGAKQVL GRGWAAWAKG DTTTAMARFN QAWLLDPENG NVYHGFALIT AGRDGTASEV 
ERFFRLATSR PKVDAEAFVD YGKFLWMVKR LDESQAELNK ALRISATARN ARSHVAFTYY 
LKNDFTNACT WAWEARNNGD ELERGFLEEM CNRAGKPDEG KPASPAGPPA