| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3985 |
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| Symbol | |
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| ID | 7974550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4228578 |
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| End bp | 4229000 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794571 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945865 |
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| Protein GI | 239816955 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5649] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.691388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGT CGGACGCGAG CACCGGCCAG CCGGCATCGG AACTCATCTC GCAACGCATC
GCCGAGCTCG GCGGCTGGCG CGGCGAAACG CTGGGCCGCA TGCGCAAGCT CATCCAGCAG
GCGGACCCGG AAGTCGTCGA GGAATGGAAG TGGATGGGCA CGCCGGTCTG GTCGCACGGC
GGCATCATCT GCACGGGCGA GTCCTACAAG GACAAGGTGA AGCTCACCTT CGCCAAGGGC
GCCTCGCTGC CGGACCCGGC CGGCCTCTTC AACGCGAGCC TGGACGGCAA CATGCGCCGC
GCGATCGACA TCTTCGAAGG CGACGAAATC GATGGGGCCG CCTTCAAGGC GCTCGTGCGC
GAGGCGGTGG CGCTCAACAG CGCCGGCAAG CCCAAGCCCG CGAAGAAGAC CGCCAAGTCC
TGA
|
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| Protein sequence | MKKSDASTGQ PASELISQRI AELGGWRGET LGRMRKLIQQ ADPEVVEEWK WMGTPVWSHG
GIICTGESYK DKVKLTFAKG ASLPDPAGLF NASLDGNMRR AIDIFEGDEI DGAAFKALVR
EAVALNSAGK PKPAKKTAKS
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