| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3974 |
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| Symbol | |
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| ID | 7974539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4216931 |
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| End bp | 4218526 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794560 |
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| Product | Rhodanese domain protein |
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| Protein accession | YP_002945854 |
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| Protein GI | 239816944 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2897] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.650632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTTTCCA TGACCTCTTT CATCGATCCG AAGACCCTCA AATCCTGGCT GCACGACGGC
GGCGAGATCG CGCTGCTCGA CGTGCGCGAG CACGGCCAGT ACGGCGAGGC GCACCTCTTC
TACGGCATTC CGCTGCCCTT CAGCCGGCTC GAACTCGATG CGCCGCGCCT CATGCCGCGC
CGCAGCGTGC GCGTGGTCGC GTATGACGGT GGCGATTCCG ATGTGGCCGA GCGCGCCGCC
CGCCGCCTCG CCGCGCTGGA CTACACCGAC GTGCACGTTC TGCAGGGCGG CACCCGCGCC
TGGAAGGCCG CGGGCCATGC GCTCTTCGCG GGCGTCAACC TGCCTTCGAA GACCTTCGGC
GAACTGGCCG AAGAGGCCTA TCACACGCCG CGCGTGAGCG CCGACCAATT GGCCGAGATG
CTGGCGCGCA AGGACAAGGT GGTGGTGCTC GATGGCCGGC CGGTGAGCGA GTTCCACAAG
ATGAACATCC CCACGGCCAC CTGCTGCCCC AATGGCGAGC TGGCCTACCG CGTGCGCCGG
CTGGTGCCCG ACACCACCAC GCCCATCGTC ATCAATTGCG CGGGCCGCAC GCGCAGCATC
ATCGGCGCGC AGACGCTCAT CAACCTGGGC CTGCCCAACC CTGTCTATGC GCTGGAGAAC
GGCACGCAGG GCTGGTACCT GAACGACCAC GCGCTGGAGC ACGGCGGCAC GCGGCGCTAT
GCGGCGGACA GCGGCAACAC CGACCTGCGG CCGGCCGCCA AGGCGCTGGC CGAGCGCTTC
GGCGTGCCCA CGGTCACGGC GCAAACGGTG CAGCAATGGG CCGGCGACGG CAGCCGCAGC
CTGTTTCTCT GCGACGTGCG CACGCCGGAG GAATTCGCGG CCCGCACGCT GCCCGGCGCG
CAGCACACGC CCGGCGGGCA GTTGATGCAG GCCGGCGACC AGTACGTCGG CGTGCGCGGC
GCGCGGCTCG TGCTGTTCGA CGACGACGGC GTGCGCGCGC CCACCATTGC GCACTGGCTG
CGGCAGATGG GCCACGAAGC GAGCGTGCTC GAAGGCGGAC TCGCGAGCGG GCTGTCGCTC
GCGCCCGCCG CAGCGCCCGC TGCACCCGCG CTGGCGACGA TCGATGCAGA GGCGCTGTCC
GCCCGCCTTG CGCAGGGCGA GGTGGCGCTG GTCGACCTGC GCCCGAGCAT GCAGTTCCGC
GCCGGCCACA TCCCGCAGGC GCGCTGGTCG ATACGCCCGC GCCTCGCCCA GGACGCGAAG
AGCGAAACGC GCCAGCTCGT GCTGGTGGCC GACGACGCTG CGCTCGCGGC CTGGGCCGCG
GCGTCCGAGC TGGCCGGCCT CTCGCCCGCG CCGCTGCTGC TCGAAGGCGG CATGGCCGCA
TGGCGCGATG CCGGCCTGCC GGTGCAGGCC ACGCCCGCCC TGCCCGCGGA CGCGGACTGC
ATCGACTACC TGTTCTTCGT GCACGACCGC CACGACGGCA ACAAGGAAGC GGCACGCCGC
TACCTCGCCT GGGAGACCGG CCTGGTCGCG CAGCTCGATG CGCAGGAGCG CTCGGCCTTC
AGGCTGCCCA CCGCTTCCGC CGCGCGGCAC GCCTAG
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| Protein sequence | MLSMTSFIDP KTLKSWLHDG GEIALLDVRE HGQYGEAHLF YGIPLPFSRL ELDAPRLMPR
RSVRVVAYDG GDSDVAERAA RRLAALDYTD VHVLQGGTRA WKAAGHALFA GVNLPSKTFG
ELAEEAYHTP RVSADQLAEM LARKDKVVVL DGRPVSEFHK MNIPTATCCP NGELAYRVRR
LVPDTTTPIV INCAGRTRSI IGAQTLINLG LPNPVYALEN GTQGWYLNDH ALEHGGTRRY
AADSGNTDLR PAAKALAERF GVPTVTAQTV QQWAGDGSRS LFLCDVRTPE EFAARTLPGA
QHTPGGQLMQ AGDQYVGVRG ARLVLFDDDG VRAPTIAHWL RQMGHEASVL EGGLASGLSL
APAAAPAAPA LATIDAEALS ARLAQGEVAL VDLRPSMQFR AGHIPQARWS IRPRLAQDAK
SETRQLVLVA DDAALAAWAA ASELAGLSPA PLLLEGGMAA WRDAGLPVQA TPALPADADC
IDYLFFVHDR HDGNKEAARR YLAWETGLVA QLDAQERSAF RLPTASAARH A
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