| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3973 |
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| Symbol | |
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| ID | 7974538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4216259 |
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| End bp | 4216849 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794559 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945853 |
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| Protein GI | 239816943 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.450102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCC TGTCCGACCC ACGCCGCGAG GCGGTCGCCG CGTCCATCGA CCGGATGAAG
AAAGCCATTG GCGGCGCTGA ACCAACCCGT GAAAAGCTCG ATGCGGTGCT CGAAGCGCTG
CAAGGGCTGG CCGCGCGCAC CGACTACTGG GGGCCCGCCG ACTTTCCGGC GCCCGAGGCC
GGCGAGCACC AGGCCCGCTA CCTGATTGCC GAGGACCCGG ACCAGAGCTA TGCGCTTTAT
CTCAACGTGA TGCGCCCGGG CAAGAAGATC GTGCCGCACA ACCACACCAC CTGGGCCTGC
ATTGCCGCGG TGGAAGGCAC CGAGCACAAC CGCGTGTACG AGCGGCGCGA CGACGGCTCG
GTGCCGGGCG TCGGCAAGCT CGAGCAAACC GCGCTGGTGG TGGTCGCGCC CGGCAAGGGC
ATTGCGCTGA TGCCCGAGGA CATCCACTCG GTCGAGATCC AGGGCGACCA GGTCATTCGG
CACCTGCACA TGTATGGCCG CGCGCTCGAG ACGCTGAATC AGCGCACCGC GTACGACCTG
GAAGCCGGCA CCTGCCAGAC GATGGGCATC GGCGTGCAGA CGCGCCGCTA G
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| Protein sequence | MSTLSDPRRE AVAASIDRMK KAIGGAEPTR EKLDAVLEAL QGLAARTDYW GPADFPAPEA
GEHQARYLIA EDPDQSYALY LNVMRPGKKI VPHNHTTWAC IAAVEGTEHN RVYERRDDGS
VPGVGKLEQT ALVVVAPGKG IALMPEDIHS VEIQGDQVIR HLHMYGRALE TLNQRTAYDL
EAGTCQTMGI GVQTRR
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