| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3932 |
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| Symbol | |
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| ID | 7970361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4172115 |
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| End bp | 4173008 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794518 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002945812 |
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| Protein GI | 239816902 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCA AACTGTCCCT CGCTTTCGGC GCCAGCATCG CGCTGCTGTG CGGCGCCGCG
GCCGCGCAGG AGAGCCCCAC GCTGCGCAAG ATCAAGGAAA CGGGCACGGT GCAGATCGGC
AGCCGCGACA CGCAGATCCC GTTCTCCTAC AAGACCGGCG CCGAGAGCGC GCCCATCGGC
TTCACCAACG AGATCTGCCT GAAGGTGGTG GATGCCATCA AGGCCAAGCT CGGCCTTTCG
AAGATCGAGG TGCGCTACAC GCTCCTCAAT TCGACCAACC GCATTCCGCT GGTGCAGAAC
GGCACGGTCG ACCTCGACTG CGCGACCACC ACCAACACCG TGCAGCGCCA GCAGCAGGTC
GACTTTGCGC CGAGCCATTT CGTCACCAAC ATCACGGCCG CGGTCAAGAA GAACTCGGGC
ATCAACTCGA TCGCCGACCT GCAGGGCAAG ACCGTGGCCA CCGTGGCGGG CAGCACCTCG
ATGCAGCTGC TGCGCGGCTT CCGCAAGACC GAGAACATCG AGGTGCAGGA GATCGCGGGC
AAGGACACGG CCGATGCCTT CCTGCTGCTC GCGAGCGACC GCGCCGCGGC CTATGTGCTG
GACGACGTGC AGCTGGCCGG CCTCATCGCC AACCAGCCCA ATGCCGCCGA CTACAAGCTG
CTGAAGGACG TGCTGCGCCA GGAACCCTAC GGCATCATGA TGCGCAAGGA CGACCCCGAG
TTCAAGGCAA TCGTCGACCA GGCCGTGACC GAGATGATGA AGTCGGGCTC CATCGACAAG
CTCTACGCGA AGTGGTTCAT GTCGCCCATT CCGCCGCGCA ACGTGAACCT CAACTTCCCG
ATGTCCGACG CGGTGCGCGA GGCCTACAGG AACCCGAACA ACAAGGGCGT TTGA
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| Protein sequence | MNFKLSLAFG ASIALLCGAA AAQESPTLRK IKETGTVQIG SRDTQIPFSY KTGAESAPIG
FTNEICLKVV DAIKAKLGLS KIEVRYTLLN STNRIPLVQN GTVDLDCATT TNTVQRQQQV
DFAPSHFVTN ITAAVKKNSG INSIADLQGK TVATVAGSTS MQLLRGFRKT ENIEVQEIAG
KDTADAFLLL ASDRAAAYVL DDVQLAGLIA NQPNAADYKL LKDVLRQEPY GIMMRKDDPE
FKAIVDQAVT EMMKSGSIDK LYAKWFMSPI PPRNVNLNFP MSDAVREAYR NPNNKGV
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