Gene Vapar_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3924 
Symbol 
ID7970353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp4164166 
End bp4164708 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content71% 
IMG OID644794510 
Producthypothetical protein 
Protein accessionYP_002945804 
Protein GI239816894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.261527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTGA CTCACTGTAT AAACCCGGCG ATGAACCGTC AGCTTACGCC GCGCCGCCTC 
GCCCTTCTTG CCTCTTCCCT CTGCGCCCTC TGGATCGCCG GATGCGGCAC CACCGGCCCC 
GGCGCCGGTT CTGTGCCCGG CCAGCTGAGC GGGGCCACGG CCGACCGCAG CGCCAGCGGC 
CCCGCGCCGC GCGCATCGAA TGCGGCCACC GCGCGCGACT ACCGCCGCGA TGCCGCGCGC 
CACATCTACG AGATCAACCG CTCGCGCATC TACGGCGGCC AGCTGCCGCC GCTGCTCTAT 
GCCGTGGGCA CGCTGCAGGT GAACCTCGAT GCCGGCGGCC GCGTGGTGTC GATGCACTGG 
ATGCGCGCGC CCAAGCATGC GCCCGAGGTC ATCGCCGAGA TCGAACGCGC GGTACTGCAG 
GCCGCGCCCT TCCCCGCCGC CACGCGCCTC GGCCCGGTCA CCTGGACCGA CACCTGGCTG 
TGGGACAAGA GCGGGCGCTT CCAGCTCGAC ACCCTGACCG AAGGACAGTC CCAGGGGGAT 
TGA
 
Protein sequence
MRVTHCINPA MNRQLTPRRL ALLASSLCAL WIAGCGTTGP GAGSVPGQLS GATADRSASG 
PAPRASNAAT ARDYRRDAAR HIYEINRSRI YGGQLPPLLY AVGTLQVNLD AGGRVVSMHW 
MRAPKHAPEV IAEIERAVLQ AAPFPAATRL GPVTWTDTWL WDKSGRFQLD TLTEGQSQGD