| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3905 |
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| Symbol | |
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| ID | 7970334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4138706 |
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| End bp | 4139689 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794491 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945785 |
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| Protein GI | 239816875 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGACC AAGCGCTGTT CGACAAGATC GATCTTCATC TGATCCGGGT GCTTCACACC
GTGCTGACCG ACCGCAGCGT CTCGCGCGCC GCCATTCGCC TGGGCATGTA CCAGCCGGCC
GTCTCGGCCG CGCTGAAGCG GCTGCGCGAA CTCTCGGGCG ATCCGCTGCT GGTGCGATCG
GGCTCGGGCA TGGTGCCGAC CGATGCGGGG CTGCGGATGA TCGAGCCGGC CGCAAGCATC
CTGCGTGCGG CCGAGATGCT TTTTTCCGAT GCGCGCGGCT TCGAGCCGCA GTCGGCGGCC
ACCACCTTCC GCATCGCGGC CAGCGACTAC ATGGACCCGC TGTTCCTGCC GATGCTGGTG
GCGCATGTCA AGCGCGAGGC GCCGCTGTGC CAGATCGAGA TCCATGCGCT CACGCCCGAT
TCCGACTACC ACGGCCACCT CGCACTCGGC CAGGTCGACC TGGTGATCGG CAACTGGCTC
AAGCCGCCGG AAGACCTGCA CATGGCGCGG CTCTTCGGCG ACGAGGTGGT GTCGCTGGTC
AACCAGGACC ACCCGGCCGT GCGCCGCGGC TGGGACCTGG AGACCTGGCT CGCGGCCGAG
CACATCGCCC CCACGCCCAT GCACCCGGGC GGGCGCGGCA TCATCGACCA GATGCTCGAC
GAGCTGGGCC GGCAGCGCAA CATCACGGCG CGCTGCGCGC ACTTCAGCCT GATCCCGGAC
ATGGTCGCGT CGAGCCTGCT GGTGCTCACC ACCGGCCGCC AGTACTGCGA GCGCTTTGCC
GCGCGCCTGC CGGTGAAGAT CCTCGAGTGC CCGGTGGCGC TGCCGCGCCT CATGTACTAC
CAGCTCTGGC ACGAGCGCAC CCATTCGTCG AGTTCCGCGC GCTGGCTGCG CGAATGCATC
AAGGACGTGG CGGCGTCGCT GCGGCCCGCC TTCACCACGC CGGCCTCGCG CGCTTTCGCG
GCCGAAGCCC CCGATCCGCC CTGA
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| Protein sequence | MRDQALFDKI DLHLIRVLHT VLTDRSVSRA AIRLGMYQPA VSAALKRLRE LSGDPLLVRS
GSGMVPTDAG LRMIEPAASI LRAAEMLFSD ARGFEPQSAA TTFRIAASDY MDPLFLPMLV
AHVKREAPLC QIEIHALTPD SDYHGHLALG QVDLVIGNWL KPPEDLHMAR LFGDEVVSLV
NQDHPAVRRG WDLETWLAAE HIAPTPMHPG GRGIIDQMLD ELGRQRNITA RCAHFSLIPD
MVASSLLVLT TGRQYCERFA ARLPVKILEC PVALPRLMYY QLWHERTHSS SSARWLRECI
KDVAASLRPA FTTPASRAFA AEAPDPP
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