| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3897 |
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| Symbol | |
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| ID | 7970326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4129200 |
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| End bp | 4130198 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794483 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945777 |
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| Protein GI | 239816867 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0101322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACATTC ACTCTCACTC GCCCCTTCGC CTGCGTTCGC TCGCCGTGGC CGCCTTCGCC
GGCGGATTGC TGTTGAGCGG CGGCGCGTTC GCGCAGGCCG CGGGCTACCC GGGCAAGCCC
GTCACCATCG TGGTGCCCTA TCCGGCGGGC GGCTCGAACG ACACCTTCGC GCGCCAGGTG
GCCAAGGAAC TGGGCGACGA GCTCAAGCAG CCGGTGATCA TCGACAACCG TCCCGGCGCG
AGCGGCAACA CCGGCACCGG CCAGGTCGCC AAGGCCGCGC CCGACGGCTA CACGCTGGTG
GCCGTGTCCT CGAGCATGAC GACCAACGCG GCCGTGCAGT CCAAGCTGCC CTTCGATCCG
ATCAACGGGC TGGCACCGGT GGCCATGTTC GCCAAGGGCC CCTTCATCGT CGCGGTGAAC
AACGAGTTTC CCGCCAAGAC GCCCACCGAG CTGATCGCCG CCATCAAGGC CAGGCCGGGG
CAGTACAACT ATGCGTCGTC GGGTTCGGGC AGCGTCAACC AGTTCGGCAC CGAACTGCTC
AAGGCCAAGG TCGGCGACAT GCAGATCACG CACATCCCGT ACAAGGGCAT GGGCCCGGCC
GTGACCGACC TGGTCGGCAA CCAGACGCAG CTCTTGATCT CCAGCGGTCC TTCGCTGCTG
CCGATGGTGC GCGCGGGCAA GCTGCGCGCC GTGGGCATCA CGAGCCTGAA GCCGAGCCCG
ATCGCGCCCG AGCTCATCCC GATGTCCACC GCCGTGCCGG GCTACGAGTT CGAGCTCTGG
TGGGGCCTGC TGGCACCGGC CGGCACGCCG GCCGACGTGG TCGCCAAGCT CAACGCCGCT
GTCAACAGGA TCCTGGCCAA GCCCGAGATC GCGGCCAACT TCCTGCGCGA AGGCGCCATT
GCCACGCCGC TCACGCCAAA GCAGTTCGGC GCGGTCATCG CCGAGGACGT CGAGCGCTGG
AAGAAGCTCG CCAAACAGCA GAACATCACC GCCGACTGA
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| Protein sequence | MHIHSHSPLR LRSLAVAAFA GGLLLSGGAF AQAAGYPGKP VTIVVPYPAG GSNDTFARQV
AKELGDELKQ PVIIDNRPGA SGNTGTGQVA KAAPDGYTLV AVSSSMTTNA AVQSKLPFDP
INGLAPVAMF AKGPFIVAVN NEFPAKTPTE LIAAIKARPG QYNYASSGSG SVNQFGTELL
KAKVGDMQIT HIPYKGMGPA VTDLVGNQTQ LLISSGPSLL PMVRAGKLRA VGITSLKPSP
IAPELIPMST AVPGYEFELW WGLLAPAGTP ADVVAKLNAA VNRILAKPEI AANFLREGAI
ATPLTPKQFG AVIAEDVERW KKLAKQQNIT AD
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