| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3884 |
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| Symbol | |
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| ID | 7969741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4115904 |
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| End bp | 4116710 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794470 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002945764 |
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| Protein GI | 239816854 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.369279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGC AGCAAAACTT CCTGCACCTC TGGGACGACA GGTTTCTCTA CATCACGCCG
GCGATCCAGT CGGGGCTCAC GGCGCGCTCG TCGGCGACGC TGCTGGCGTC GGTCAGCGGC
CATCCGTTCA TGCTCGAGGC GCTCGACGGC ACGCGCGTGC ACTGCACCGC CGCGCTGGTG
GCCCCGCATG TGTCGCGCCG GCTCGACGTC GATGGTTGCG GGCTGCTGTC GCTCAACCTC
GATCCGGCAT CGAGCGCCTA CCGCATGCTC GCGCGCTGCA TGGGCGGGCA CGGCATCGAG
CCGATCGATG CGCGCTGCTT CGGCAAGCTG CGCGACGACT TCGAACCCGC GCAGCGCGGG
CTGCTTGGCG ACGCCCGGCT GCAGTCGCTC AGCGCCAGGA TGGTCGAGGC GATCACCGGA
TGCCCGGAGC TCGTGGCGCC GATCGACCGG CGCATCGAGC GCGTGCTGCA GGCCATCCGC
GAACACGCCG GCCAGATCCC GCTGAAGAAG CTCTCGGCCG TGGCCTGCCT CTCGCCCGAC
CGGCTGACGC ATCTCTTTGC CGAGCAGGTG GGCGTGTCGG TCAAGCGCTA TGCGCTGTGG
ACCAAGGTGC GGCGCACGGT GCAGCAGTTC ACCGGGCATC GGCCGCTCAC CGACGTGGCG
TTGGTCAGCG GCTTCACCGA TGCGGCGCAC ATGAGCCGCA CCTTCCAGCG CTACTTCGGG
CTGCCGCCGT CGTTTCTCGC GAGCCGGGTG CATGTGACGG CGGACGCGCA GGCCTCGCAC
GCCTGGGGCC ACGCGACCGT CCACTGA
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| Protein sequence | MTTQQNFLHL WDDRFLYITP AIQSGLTARS SATLLASVSG HPFMLEALDG TRVHCTAALV
APHVSRRLDV DGCGLLSLNL DPASSAYRML ARCMGGHGIE PIDARCFGKL RDDFEPAQRG
LLGDARLQSL SARMVEAITG CPELVAPIDR RIERVLQAIR EHAGQIPLKK LSAVACLSPD
RLTHLFAEQV GVSVKRYALW TKVRRTVQQF TGHRPLTDVA LVSGFTDAAH MSRTFQRYFG
LPPSFLASRV HVTADAQASH AWGHATVH
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