| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3876 |
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| Symbol | |
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| ID | 7969733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4105469 |
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| End bp | 4107094 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794462 |
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| Product | Rhodanese domain protein |
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| Protein accession | YP_002945756 |
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| Protein GI | 239816846 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2897] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCA CCGCCTTCCC CCTGCTGCCC TTCGCCGCCG TGCGCGCGCG CCTGCTCGCA
CGCGACGAAA CCGCGCTGCT CGACGTGCGC GAGGAAGACC CCTTCGCGCA GGAGCATCCG
CTGTGGGCCG CCAACCTGCC GCTCTCGCGC ATCGAGATCG AGGCCTGGCG GCGCATTCCG
CGGCGGGACA CCTTCATCGT GCTGTACGGC GCGCACAACG GCACCGAACT GGCGCCGCTC
GCCGCGCGCA CGCTGGCTGC AATCGGCTAC ACCAACCTGC ACCTGCTCGA AGGCGGCCTC
GAAGGCTGGC GCGCGGCCGG CGGCGAGCTG TTCCGCGACG TGAACGTGCC GAGCAAGTCC
TTCGGCGAAC TGGTCGAGCA CGAGCGGCAC ACGCCCTCGC TCTCCGCGCC CGAGGTGAAG
GCGCTGGTCG AGGGCCAGGC CGACGTGGTG GTGCTCGACG CGCGCCGCTT CGACGAATAC
CGCACGATGA GCATCCCCTC GGCCACCAGC GTGCCCGGCG CCGAGCTGGT GCTGCGCGTG
CGCGAGCTGG CACCCGACCC GGCGACGCAG GTGATCGTCA ATTGCGCGGG CCGCACGCGC
AGCATCATCG GCACGCAGTC GCTGGTGAAT GCGGGCATTC CGAATCCGGT GGCGGCGCTG
CGCAACGGCA CCATCGGCTG GAAGCTCGCG GGGCAGGTGC TCGACCATGG CGCGGACCGC
AAGGCGCCGG CCGTGGTGTC CGATGCGCAC CGCGTGCAGG CACAGGCCGA TGCGCGGCGC
GTGGCCGAGA GGGCCGGCGT GCGCCGCATC GGGCTCGATG CGCTGCACGC GCTGGAGGCC
CCGGGGCGCA CCGTGTACCG CTTCGACGTA CGCACGCCCG AGGAATACGA GGCCGGCCAC
CTGCCCGGCT TTGCGAGCGC ACCCGGCGGC CAGCTGGTGC AGGAAACCGA TCACCAGGTG
CCGGTGCGCG GCGCACGCAT CGTGCTGGCC GACGACGACG GCGTGCGGGC ATCGATGAGC
GCGTCCTGGC TCGCGCAGAT GGGCTGGGAG GTCTACGTGC CCGACGCGGT GCCGCCCGCC
TCGGCCTTCA CCGAGACGGC TGCGCCGCCG CCCGCCTACC CACCCGCCGC GGCCGCCGTG
GCGGAGATCT CGCCCGTGGA GCTGGCGGCC TTGCTGAAGC AGCAGATCGG CACGGCGGTG
ATCGATGTGA CCACCAGCGC CAACTACGTG AAGCGCCACA TCCCGGGTGC CTGGTACGCC
ATCCGCGCGC AGCTCGCGGG TGCGATCGAC GCGGCCATTC CCGCATCGCA ACGCTATGTG
CTGACCTGCG GCAGCAGCCT GCTCGCACGT TACGCCGCGG CCGACCTGCG CCTGCTGCTC
GATGCGCGCG GCCAGCGCGA CGTGGAAGTG CTGTCGCTGG CCGGCGGTAA CGCGGCATGG
TTTGCGGCAG GCCTGGAGGC GGAAACCGGC GAGACGCGGC TTGCGACGCC GCGCACCGAC
CGCTACCGCA GGCCCTACGA AGGCACCGAT GCACCGGCGG AGGCCATGCA GGCCTACCTG
GACTGGGAAT ACGGCTTGGT CGCGCAGCTG GCGCGCGACG GCACGCACCA TTTCCACGTG
ATCTGA
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| Protein sequence | MTTTAFPLLP FAAVRARLLA RDETALLDVR EEDPFAQEHP LWAANLPLSR IEIEAWRRIP
RRDTFIVLYG AHNGTELAPL AARTLAAIGY TNLHLLEGGL EGWRAAGGEL FRDVNVPSKS
FGELVEHERH TPSLSAPEVK ALVEGQADVV VLDARRFDEY RTMSIPSATS VPGAELVLRV
RELAPDPATQ VIVNCAGRTR SIIGTQSLVN AGIPNPVAAL RNGTIGWKLA GQVLDHGADR
KAPAVVSDAH RVQAQADARR VAERAGVRRI GLDALHALEA PGRTVYRFDV RTPEEYEAGH
LPGFASAPGG QLVQETDHQV PVRGARIVLA DDDGVRASMS ASWLAQMGWE VYVPDAVPPA
SAFTETAAPP PAYPPAAAAV AEISPVELAA LLKQQIGTAV IDVTTSANYV KRHIPGAWYA
IRAQLAGAID AAIPASQRYV LTCGSSLLAR YAAADLRLLL DARGQRDVEV LSLAGGNAAW
FAAGLEAETG ETRLATPRTD RYRRPYEGTD APAEAMQAYL DWEYGLVAQL ARDGTHHFHV
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