| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3845 |
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| Symbol | |
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| ID | 7969702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4067065 |
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| End bp | 4067853 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794431 |
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| Product | ABC transporter related |
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| Protein accession | YP_002945725 |
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| Protein GI | 239816815 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4525] ABC-type taurine transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACGC TCGACATCCG CGACCTCACG GTCAACTACG CCGTCAAGGG CGGCACGCTG
CAGGCGCTGG CGCCGGTCAA CCTCACGATG CGCGACGGCG ACTTCGTCGT GGCGCTCGGC
GCCTCGGGAT GCGGCAAGAC CACGCTGCTC AACAGCATTG CGGGCTTCCT GCCGCCTTCC
ACCGGCGACA TCCTGCTCGA CGGCAAGCCC GTGGTCGGCC CCGGCGCCGA CCGCGGCGTG
GTGTTCCAGA AGCATGCGCT GATGCCCTGG CTCAACGTGC GCGACAACGT GGCGCTGGGC
CTGCGCCTGG CCGGCGCCGG CAAGGCCGAG CGCGACCGCG TCGCGGAAGA AAAGCTCGCG
CTGGTGGGCC TGCAGCAGTA CGCGGACCGC GCGGTGTACG AACTCTCTGG CGGCATGCAG
CAGCGCGTGG GCATTGCGCG CGCGCTGGCC AGCGACCCGG CCGTGCTGCT CATGGACGAG
CCCATGGGCG CGCTCGACGC GTTCACGCGC GAGCAGGTGC AGGAGATCCT GCTCAAGGCC
TGGTCCAAGT CGAACAAGAT GGTGTTCTTC ATCACGCATT CGGTCGAGGA GGCGCTGTTC
CTGGCCACCC GGCTGATCGT GATGAGCCCG AGCCCGGGGC GCATCTCGCA CATCTACGAC
GAGGTTCCGT TCTCGCGCCA GTTCCTGTCG CACGGCGACT CGCGCAAGGT GAAGTCGGAG
CCCGAATTCA TCCGCATGCG CGAAGAGGTT CTTTCGATCA TTCATCATCG CGAGGCTGCC
CATGCCTGA
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| Protein sequence | MPTLDIRDLT VNYAVKGGTL QALAPVNLTM RDGDFVVALG ASGCGKTTLL NSIAGFLPPS
TGDILLDGKP VVGPGADRGV VFQKHALMPW LNVRDNVALG LRLAGAGKAE RDRVAEEKLA
LVGLQQYADR AVYELSGGMQ QRVGIARALA SDPAVLLMDE PMGALDAFTR EQVQEILLKA
WSKSNKMVFF ITHSVEEALF LATRLIVMSP SPGRISHIYD EVPFSRQFLS HGDSRKVKSE
PEFIRMREEV LSIIHHREAA HA
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