Gene Vapar_3839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3839 
Symbol 
ID7969696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4060694 
End bp4060915 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content67% 
IMG OID644794425 
Producthypothetical protein 
Protein accessionYP_002945719 
Protein GI239816809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.155146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGCC AATACATCGA CTGCCGCGAG TTTCCAAGCA CGATGAACTG CAGTGTCGCG 
CTCTCCGCCG ATAGCGAGAG CGAACTGCTC GATGCCGCCG TCCAGCACGC CGTGGCCGTC
CACGGCCACG CCGACACGCC GGAATTGCGC ACGCAGCTCG CAAGCATGTT CAAGACCGGC
ACGCCGCCGC TGCAGGCGCC TGCGCAGGCG ACCCCCGCCT GA
 
Protein sequence
MSRQYIDCRE FPSTMNCSVA LSADSESELL DAAVQHAVAV HGHADTPELR TQLASMFKTG 
TPPLQAPAQA TPA