| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3825 |
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| Symbol | |
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| ID | 7969682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4043279 |
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| End bp | 4045102 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794411 |
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| Product | sulfoacetaldehyde acetyltransferase |
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| Protein accession | YP_002945705 |
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| Protein GI | 239816795 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR03457] sulfoacetaldehyde acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.858122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA AGCAACCCGC CGCACCCACC CGCGAAGCCG TCGCCGGCGT GCAGAAGATG
ACGCCCTCCG AGGCCTTCGT CGAAACCATG GTCGCCAACG GCGTGACCGA CATCTTCGGC
ATCATGGGCT CGGCCTTCAT GGATGCGATG GACATCTTCG CGCCCGCCGG CATCCGCCTG
ATCCCGGTGG TGCACGAGCA GGGCGGCGCC CATATGGCCG ACGGCTATGC GCGCGTGTCG
GGCCGCCACG GCGTGGTGAT CGGCCAGAAC GGCCCCGGCA TCAGCAACTG CGTGACGGCC
ATCGCGGCCG CCTACTGGGC ACACAGCCCG GTCGTGATGA TCACGCCCGA GACCGGCACC
ATGGGCATGG GCCTGGGCGG CTTCCAGGAA GCCAACCAGC TGCCGATGTT CCAGGAGTTC
ACCAAGTACC AGGGCCACGT CAACAACCCC AAGCGCATGG CCGAGTACAC CGCGCGCTGC
TTCGACCGCG CCATCTCCGA GATGGGCCCG ACGCAGCTCA ACATTCCGCG CGACTACTTC
TACGGCGAGA TCACCACCGA GATCCCGAAG CCCATGCGCG TGGAGCGCGG CGCGGGCGGA
GAGAACAGCT TGAACGCGGC CGTCGAGCTG CTGGCCTCGG CGAAGTTTCC GGTCATCCTC
TCGGGCGGCG GCGTGGTGAT GGGCGATGCG GTCGAAGAAT GCAAGGCCCT GGCCGAGCGC
CTGGGCGCGC CCGTGGCCAA CGGGTACCTG CGCAACGACT CGTTCCCCGC GAGCCATCCG
CTTGCCGCGG GCCCGCTGGG CTACCAGGGC TCCAAGGCCG CAATGAAGCT GATCGCGCAG
GCCGACGTGG TGCTGGCGCT CGGCTCGCGC ATGGGCCCCT TCGGCACCTT GCCGCAGCAC
GGCATGGACT ACTGGCCGAA GGACGCGAAG ATCATCCAGG TGGAAGCCGA CCACACCAAC
CTGGGCCTCG TGAAGAAGAT CACCGTCGGC ATCCACGGCG ACGCCAAGGC CACGGCCAAT
GAACTGCTCA AGCGCCTGCA GGGCAAGACC CTGGCCTGCG ATGCCACCAA GGCCCAGCGC
GCCGACAAGA TCAAGGCCGA AAAAGCCGCG TGGGAAAAAG AACTCGACGA GTGGACCCAC
GAGCGCGACC AATTCAGCCT CGACGCCATC GAAGAGGCCA AGGGCGAGAA GACGCCCACC
GGCGGCACCT ACCTGCACCC GCGCCAGGTG CTGCGCGAGC TCGAGAAGGC CATGCCGCCG
CGCGTGATGG TCTCCACCGA CATCGGCAAC ATCAACGCCA TTGCCAACAG CTACCTGCGC
TTCGAGGAGC CGAGGAGCTT CTTCGCGCCG ATGAGCTTCG GCAACTGCGG CTACTCGCTG
CCGACCATGA TCGGCGCCAA GTGCGCGGCG CCCGACCGCC CGGCCGTGGC CTATGCCGGC
GACGGCGCCT GGGGCATGAG CATGGTCGAG ATCATGACCG CCGTGCGGCA CGACATCCCG
GTGACGGCCG TGGTCTTCCA CAACCGCCAG TGGGGCGCGG AAAAGAAGAA CCAGGTCGAC
TTCTACAACC GCCGCTTCGT CGCGGGCGAG CTCGAGAGCG AGAGCTTCGC GGGCATTGCC
AAGGCCATGG GTGCCGAGGG CATCGTGGTC GACAGGCTCG AGGACGTGGG CCCGGCACTG
AAGAAGGCGA TCGACATGCA GATGAACCAG AAGAAGACCT GCGTGATCGA GATCATGTGC
ACCCGCGAGC TCGGCGATCC GTTCCGCCGC GATGCGCTGT CCAAGCCGGT GCGCTTCCTC
GACAAGTACA AGGACTACGT CTGA
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| Protein sequence | MSQKQPAAPT REAVAGVQKM TPSEAFVETM VANGVTDIFG IMGSAFMDAM DIFAPAGIRL
IPVVHEQGGA HMADGYARVS GRHGVVIGQN GPGISNCVTA IAAAYWAHSP VVMITPETGT
MGMGLGGFQE ANQLPMFQEF TKYQGHVNNP KRMAEYTARC FDRAISEMGP TQLNIPRDYF
YGEITTEIPK PMRVERGAGG ENSLNAAVEL LASAKFPVIL SGGGVVMGDA VEECKALAER
LGAPVANGYL RNDSFPASHP LAAGPLGYQG SKAAMKLIAQ ADVVLALGSR MGPFGTLPQH
GMDYWPKDAK IIQVEADHTN LGLVKKITVG IHGDAKATAN ELLKRLQGKT LACDATKAQR
ADKIKAEKAA WEKELDEWTH ERDQFSLDAI EEAKGEKTPT GGTYLHPRQV LRELEKAMPP
RVMVSTDIGN INAIANSYLR FEEPRSFFAP MSFGNCGYSL PTMIGAKCAA PDRPAVAYAG
DGAWGMSMVE IMTAVRHDIP VTAVVFHNRQ WGAEKKNQVD FYNRRFVAGE LESESFAGIA
KAMGAEGIVV DRLEDVGPAL KKAIDMQMNQ KKTCVIEIMC TRELGDPFRR DALSKPVRFL
DKYKDYV
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