| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3817 |
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| Symbol | |
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| ID | 7969674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4035511 |
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| End bp | 4036281 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794403 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002945697 |
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| Protein GI | 239816787 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0594434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGCT CGACAGACAT CTCCGCGTTC GAACCGATTC CCGCCGAGTC GGCGGGCGCG
CCGCTCTACC GGCTCGTCAA GCGCTCGCTG CTGCGCGCCA TCGAGTCGGG GCGCTGCGCG
GCCGGCAGCG TGCTGCCGAG CGAGAGCGAG CTGGCGGCGG CGCTCGGCGT GTCGATCGGC
ACGCTGCGCC ACGCCACCGA CGACCTGGTG GCCGAGCACA TCCTCGTGCG GCGGCAGGGG
CGCGGTACCT TCGTGGCGGT GCACAACGAC GACCGCTTCA TGTTCCAGTT CTTCCATGTG
GAGCGCAGCG ACGGCCTCAG GCAGGCGCCG CAGGTGGAGT TTGTCGCCTT CGAGCGCATG
CGCATGGACG AGGAGCCGGC GCAGGCGCTG GGGCTGCGAA CCGGCGAGCC GGCCATCCAG
ATCGACAACC GGCTGCTGCT GCAGGGCCGG GCGGTGATCC ACGACCGGCT CACGCTGCCG
GCGCTGCTCT TCAAGGGCCT GACCGAGAAG CGCTTTCGCG AGCGGCCGAG CACCATCTAC
CACCTGTACC AGACCGAGTT CGGCATCACC GTGACGCTGG CGCGCGAACG CGCACGCGCG
ATGGCGGCCG ACCGCAGCGT GGTGCGCATC CTGGGCGTGG CGCCGGGCGC GCCGGTGATG
GAGGTGCGGC GCACCGCGCT CACCTTCGGC GACAAGCCGG TGGAGTACCG CGTGTCGACC
ATCAACACGG CGCAGTACGA ATACGTGCAC CTGCTGTCGC GGCCGGCCTG A
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| Protein sequence | MPRSTDISAF EPIPAESAGA PLYRLVKRSL LRAIESGRCA AGSVLPSESE LAAALGVSIG
TLRHATDDLV AEHILVRRQG RGTFVAVHND DRFMFQFFHV ERSDGLRQAP QVEFVAFERM
RMDEEPAQAL GLRTGEPAIQ IDNRLLLQGR AVIHDRLTLP ALLFKGLTEK RFRERPSTIY
HLYQTEFGIT VTLARERARA MAADRSVVRI LGVAPGAPVM EVRRTALTFG DKPVEYRVST
INTAQYEYVH LLSRPA
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