Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3732 |
Symbol | |
ID | 7970889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3930832 |
End bp | 3931536 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644794316 |
Product | Glutathione S-transferase domain protein |
Protein accession | YP_002945614 |
Protein GI | 239816704 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.952098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACC TGTCCCGCTT TCCCATCACC CAGAAATGGC CCGCACAGCA TCCTGACCGG CTGCAGTTGT ATTCGCTGCC CACGCCCAAC GGCGTGAAGG TGTCGATCAT GCTGGAGGAA ACCGGCCTGG CCTACGAGCC GCACCTGGTG AGCTTCGAGA CCCACGACCA GATGTCGCCG GAATTCCTCT CGCTCAACCC GAACAACAAG ATCCCCGCGA TCCTCGACCC CCACGGGCCC GGCGGCAAGC CGCTCGCGCT GTTCGAATCG GGCGCCATTC TTCTGTACCT GGCCGACAAG ACCGGCAAGC TGATTCCGCA GGATGCGGCG GGCCGCTACG AAACCATCCA GTGGCTGATG TTCCAGATGG GCGGCATCGG CCCGATGTTC GGCCAGCTCG GCTTCTTCAA CAAGTTTGCC GGCAAGGACT ACGAGGACAA GCGCCCGCGC GACCGCTACG TGGCCGAATC GAAGCGCCTG CTCGGCGTGC TCGACAAGCA CCTGGCCAAC CGCGCGTGGA TCATGGGCGA CGACTACACC ATCGCCGACA TCGCCTCGTT CCCGTGGATC CGCAACCTGA TCGGCTTCTA CGAAGCGGGC GACCTGGTGG GCTTCAGCGA GTTCAAGAAT GTGGCGCGGG TGCTCGAAAC CTTCGTGGCG CGGCCGGCGG TTGTGAAGGG TCTGGGCATT CCCAAGCGCG GTTGA
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Protein sequence | MTDLSRFPIT QKWPAQHPDR LQLYSLPTPN GVKVSIMLEE TGLAYEPHLV SFETHDQMSP EFLSLNPNNK IPAILDPHGP GGKPLALFES GAILLYLADK TGKLIPQDAA GRYETIQWLM FQMGGIGPMF GQLGFFNKFA GKDYEDKRPR DRYVAESKRL LGVLDKHLAN RAWIMGDDYT IADIASFPWI RNLIGFYEAG DLVGFSEFKN VARVLETFVA RPAVVKGLGI PKRG
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