| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3697 |
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| Symbol | |
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| ID | 7973930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3897538 |
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| End bp | 3898086 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794281 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_002945579 |
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| Protein GI | 239816669 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCAAG CCCCCTCCCA GCTCGAGGCC TGGATCGCCG AAGAACGCCG GGTTGCCGGC
CGGCTCGAAA GCGGCCCCGG CCCCGGACTC GCCCGCCCCG AGCAGATCGC CGGCAAGACC
GGGCTCGAGA TGATGCAGGC CATGCTGAAC GGGGACATTC CCTTTGCGGC CATCGCGAAG
ACGCTCGACT TCACGCTGCT GTCGGTGAGC CCCGGCGTGG CCGTTTTCCA GGGTACGCCG
CTGGCCCAGC ACCTGAACCC GCTCGGCACC ATCCACGGCG GCTGGATTGC CACCGTGCTC
GATTCCGCGC TGGGCTGCTC GGTCCACACC ATGATGCCGC CCGGCCGCGC CTACACCACC
GCCGAACTCA GCGTGAACTA CGTGAAGGGC CTCACGCCCA AGGTGCAGCG GGTGCGCGCC
GAAGGCAAGG TGATCCATTG CGGCCGGCAG CTCGCCACCG CCGAGGCGCG GCTCGTGGGC
CCCGACGGCA CGCTGTATGC GCACGCCACC ACCACCTGCC TGGTGTTCGA GATCCCGTCG
CCGCGCTGA
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| Protein sequence | MTQAPSQLEA WIAEERRVAG RLESGPGPGL ARPEQIAGKT GLEMMQAMLN GDIPFAAIAK
TLDFTLLSVS PGVAVFQGTP LAQHLNPLGT IHGGWIATVL DSALGCSVHT MMPPGRAYTT
AELSVNYVKG LTPKVQRVRA EGKVIHCGRQ LATAEARLVG PDGTLYAHAT TTCLVFEIPS
PR
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