| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3677 |
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| Symbol | |
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| ID | 7973910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3875977 |
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| End bp | 3877029 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644794262 |
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| Product | peptidase S58 DmpA |
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| Protein accession | YP_002945560 |
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| Protein GI | 239816650 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3191] L-aminopeptidase/D-esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCTC CGTCATCCGC TTCGTCTTCT TCCGCTGCTT CGTCTTCCGG CGCCATCACC
GATGTGGCCG GCATCGAAGT CGGCCATTTC TCCGATACGC GCCGGCCCAC CGGCTGCACC
GTGATCCTCG CGCGCGAGGG CGCGGTGGCC GGCGTCGACG TGCGCGGCGC CGCACCGGGC
ACGCGCGAGA CCGACCTGCT CTCGCCCGGC AACCTGGTGC AGCAGGTGCA CGGCGTGATG
CTGGCGGGCG GCAGCGCCTG GGGCCTGGCC GCGGCCGAAG GCGCGATGCG CTGGCTCGAG
GAGCGCAACA TCGGCATGGA CGTGCGCTTC GGCACCCTGC CCATCGTGCC GGCCGCCGTG
CTGTTCGACC TGCCGATGGG CGACGCGCGC ATCCGCCCCG ACGCCGCCGC CGGCTATGCG
GCCTGCGAGG CGGCTACCAC CGATGCGCCG GAAGAAGGCA ACGTGGGCGC CGGCAGCGGC
GCGCTCGTGG GCAAGCTCTT CGGCGTGCAC CGCGCGATGA AGGGCGGCAT CGGCACCGCC
TCGGTCACCG TGGGCGGCGT GACGGTGGGC GCGCTCATCG CGGTCAACGC GCTGGGCGAC
GTGATCGACC CCGACACCGC CCAGCCGGTG GCCGGCGCGC GCACCGAGGA CGGCCGCACG
CTGCTCGACA CCCGCCGCGC GCTCTTGCGC GGCGAGCTGC CCAAGCCCCT GCTCGCAGGC
ACCAACACCA CGCTCGGCGT GATCGCGACC GACGCGGTGC TGACGAAGGT GCAGGCCAAC
CGCCTTGCGA GCGTGGCGCA CGACGGCCTG GCGCGCGCCA TCAACCCGGT GCACACGATG
AGCGACGGCG ACACGCTGTT CGCGCTGGCC ACCGGCCGCG TTCCGCTCGA AGGCCCCGGT
GCCGAATCCC GCCCCGGCAT GACCGTGCTC GGCACCATGG CGGCCGAGGC GGTGGCGCGC
GCCACCCTGC GCGCGGTGCT GGCGGCGCGC TCCGTCACCG TTGGCGAGCT GCACGTGCCG
TGCGCGGCCG ATCTCGCCGC AACGAAAGGT TGA
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| Protein sequence | MPAPSSASSS SAASSSGAIT DVAGIEVGHF SDTRRPTGCT VILAREGAVA GVDVRGAAPG
TRETDLLSPG NLVQQVHGVM LAGGSAWGLA AAEGAMRWLE ERNIGMDVRF GTLPIVPAAV
LFDLPMGDAR IRPDAAAGYA ACEAATTDAP EEGNVGAGSG ALVGKLFGVH RAMKGGIGTA
SVTVGGVTVG ALIAVNALGD VIDPDTAQPV AGARTEDGRT LLDTRRALLR GELPKPLLAG
TNTTLGVIAT DAVLTKVQAN RLASVAHDGL ARAINPVHTM SDGDTLFALA TGRVPLEGPG
AESRPGMTVL GTMAAEAVAR ATLRAVLAAR SVTVGELHVP CAADLAATKG
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