| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3676 |
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| Symbol | |
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| ID | 7973909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3874638 |
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| End bp | 3875936 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644794261 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_002945559 |
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| Protein GI | 239816649 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTTG CAAGAAGTTT CTCCGCGGGC GGTGCCGCGC GCCATGTGGT CGTGATCGGC
GCCGGCGCCG TGGGCAGCGC GACCGCCATC GAGGCCTTGC GCGCCGGCCT GCGCGTGACG
GTGGTGGAGC CCGGCGAGGC GGGCGGCCCG CAGGCCACGA GCTACGGCAA TGCGGGCTGG
CTCTCGTCGC ATTCCGTGGT GCCGCCTGCG CTGCCCGGTG CCTGGCGCAA GGTGCCGGGC
TGGCTGGCCG ATCCGCTGGG GCCGCTTGCG CTGCGTTGGC GCTATCTGCC GCAGGCCTTG
CCCTGGCTGC TGCGCTACCT GGCCTCGGGC TGGACCGAGG CGCGCGTGCA GCGCACGGCC
GACGCACTGC GCACGCTGCT GGCCGATGCG CCGGCGCTGC ATGCCCGGCT CGCGGCCGAG
GCCGGCGTGC CGCAGCTCAT CGAGCGGCGC GGCCTGCTGC ATGCCTACCG GTCGCGCGAG
GAATTCGAGG GCGACGCGTT CGGCTGGCGC GTGCGCCGGC GCACCGGCGT GCATTGGGAG
GAATGGCCGG TGGCCGAATT GCACCGGCGC GAGCCCGACC TCGATGCGCG CTACACGCTC
GGCATCTTCG TGCCCGAGGC CGGGCACTGC CGCAATCCCG GTGCCTATGT GGCGGCGCTC
GCACGGCACG CGCAGGAGGC CGGCGCGCAG CGCGTGGCGG CAAGCGCCAC CGGCTTTCGC
ATCGAGGGCG GGCGGCTGCG CGCGGTGCGC ACCGATGCCG GCGAGATCGC CTGCGACGCC
GCCGCCATCT GCGCCGGTGC GCGCTCGGGC CCGCTGGCCG CGGCGGCCGG ATCGCCGGTG
CCGCTCGAAT CCGAACGCGG CTACCACGTG GTCGTCGAAG GCGCGTCGGC GGGGCCGCGC
ACGCCGACCA TGGTGGCCGA CGGCAAGCTC ATTGCGCACT GGATGGACGG CGGCCTGCGC
GCGGCCGGCC AGGTCGAGAT CGGCGGGCTC GACGCCCCGC CGGACTGGCG GCGCGCGGAG
ATCCTGCACC GGCATCTGTT GTCGATGTTT CCGGCGCTTG CTGCCGAGGC GCCGCAGGCC
GTGGCCGTGA AGCACTGGCT CGGCCACCGG CCCAGCCTGC CCGACGGGCT GCCCTGCATC
GGCGCGTCCG CGGCCAGCGC GGACATCGTG CTGGCCTTCG GGCATGGGCA CGTCGGCCTG
TGCGGTTCGG CGCGCACCGG CAGGCTCGCG GCGCAATTGC TCGCGGGCAG CACGCCAGAG
ACGGCGCTGG CGCCTTTCGA TCCCGCTCGC TTCGGCTGA
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| Protein sequence | MTVARSFSAG GAARHVVVIG AGAVGSATAI EALRAGLRVT VVEPGEAGGP QATSYGNAGW
LSSHSVVPPA LPGAWRKVPG WLADPLGPLA LRWRYLPQAL PWLLRYLASG WTEARVQRTA
DALRTLLADA PALHARLAAE AGVPQLIERR GLLHAYRSRE EFEGDAFGWR VRRRTGVHWE
EWPVAELHRR EPDLDARYTL GIFVPEAGHC RNPGAYVAAL ARHAQEAGAQ RVAASATGFR
IEGGRLRAVR TDAGEIACDA AAICAGARSG PLAAAAGSPV PLESERGYHV VVEGASAGPR
TPTMVADGKL IAHWMDGGLR AAGQVEIGGL DAPPDWRRAE ILHRHLLSMF PALAAEAPQA
VAVKHWLGHR PSLPDGLPCI GASAASADIV LAFGHGHVGL CGSARTGRLA AQLLAGSTPE
TALAPFDPAR FG
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