| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3646 |
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| Symbol | |
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| ID | 7973879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3850221 |
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| End bp | 3851417 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794231 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945529 |
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| Protein GI | 239816619 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTC GCCCCGCCGC ACTGGCGACC CTTGCCCTGG CCGCACTCGC CGCGGTTTCG
GGCTGCACCA ATCTGACCCC CGCCACGGCG CAGCGCCAGC TCATGCTGGT CGCCAACGAC
GAGAAGCAGT CGTGGAGCGA CGCCGGCGCC GTGATCCTCG CGCCGATGGG GCGCGACACG
GTGCAGGTGC TGGACATCGG CACCGATCCG CTGGCGCCCA GGCTCGTCGG CAGCCTGCAG
CTGGACAACA CCATCGCCGG ACCGCCCGTC AACCTCGCGA TCACCCCCGG CGAAACGCTG
GCGCTGGTGG CCAATTCGCT CAACGTGGTG GAAGAGAACG GCGTGCGCCG GCAGGTGCCC
GACAACCGCC TGTTCGTGAT CGACCTGAGC ACCACGCCGC CCAGGCTGAT CGACACGCTC
ACCGTGGGCA AGCAGCCCTC GGGCCTGTCG ATCAACCGCG TCGGCAACCT CGCGCTGGTG
GCCAACCGCG CCGACAACTC GGTCAGCGTG CTGCGCATCG CGGGCAAGCA GGTGACGCTG
ATCGACACCG TCGCCATGGG CGACTCGGTG GCGCACGTGC GCTTCACGCC CGATGGCAAG
CGCGCGCTGG CGGCCAAGTT CACCAGCCAC AAGATCGCGC TGCTGGAGGT GAACGGCGAG
AAGGTCAGCT ACAACAAGGT CGACCTCGCG GCGGGCCTGT GGCCCTACAA CGTCGACGTG
ACGCCCGACG GCAAGCTCGC GCTCACGGCC GACAACGGCA ACTCCGGCGC ATCGGACGGA
CAGGTCGACA CGGTGAGCGT GATCGACCTC GAGGCGGTGC CGCCGCGCGT GGTCGACAAG
GTGGTGGTCG GCGACGGGCC CGAGGGCCTG GCCGTGAGCC CGACCGGCAA GCATGCGGTG
GCCGTAATCC TGCGCGGCAG CAACTCGGCA AAGAACGCCT ACTTCTACAA CCGCAACGGC
TCGGTGGTGC TGCTGAAGAT CGACGGCAAG AAGGTCTCGC GCGCCAACGA GGTGGTGGTG
CGCGGCCTGC CCGAAGGCGC CGTGTGGAGC GCCGACGGCA AGTACCTCTA CGTGGGCAAC
TTCATCGACC AGGACATCAC GATCCTGCGC GTGGACGGCG ACACGCTGGT GCCCACGGGC
AAGTCGTTTG CGCTGCAGGG CCATCCGGCC GCAATGCGCG GGACAATGTC GCACTGA
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| Protein sequence | MKFRPAALAT LALAALAAVS GCTNLTPATA QRQLMLVAND EKQSWSDAGA VILAPMGRDT
VQVLDIGTDP LAPRLVGSLQ LDNTIAGPPV NLAITPGETL ALVANSLNVV EENGVRRQVP
DNRLFVIDLS TTPPRLIDTL TVGKQPSGLS INRVGNLALV ANRADNSVSV LRIAGKQVTL
IDTVAMGDSV AHVRFTPDGK RALAAKFTSH KIALLEVNGE KVSYNKVDLA AGLWPYNVDV
TPDGKLALTA DNGNSGASDG QVDTVSVIDL EAVPPRVVDK VVVGDGPEGL AVSPTGKHAV
AVILRGSNSA KNAYFYNRNG SVVLLKIDGK KVSRANEVVV RGLPEGAVWS ADGKYLYVGN
FIDQDITILR VDGDTLVPTG KSFALQGHPA AMRGTMSH
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