| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3623 |
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| Symbol | |
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| ID | 7970698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3832928 |
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| End bp | 3834169 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794208 |
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| Product | inner membrane protein |
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| Protein accession | YP_002945506 |
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| Protein GI | 239816596 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.753162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAA CCGCATCCAC CCTGCCCGAC CGGCGGCACG ACATCGACGC GCTGCGCGCG
CTGGCCTTCC TGCTGGTCAT CCTGTACCAC GTGGCGATGT ACTACGTGGC CGACTGGCCC
TGGCACCTCA AGAGCCCGCA TGCCGCCGAA TGGCTGCAGT GGCCGATGCG CATGCTCAAC
CTCTGGCGCA TGGACCTGGT GTTCCTGGTC TCGGGCGTGT CGCTGGGCTT CCTGAGCCGC
AGCCAAGGCA CCTGGAGCCT GCTGCGCAGC CGCGGCGTGC GGCTGATGCT GCCGCTGGCC
TTCGGCATGG CGGTGGTCGT GCCCTACCAG GCCTATGCCC AGGGCGTGGC CAGCGGCTTG
GTGGCGCCGG GCTTCGGTGC CTTCCTGCTG CGCTATCTTT CGATGGGCGA TCCGTGGCCG
AAGGCGGCCT TCGACGGCGC GGAGTTCGGC ATCACCTGGA ACCACCTCTG GTACCTGCCC
TACCTGTTCA GCTACACGGC GCTCATCGCG CTCACGCTGC CGCTGTGGCG GTCACCCGCC
GGCCAGTGGA TGCGCCGCCG ATTCAACGGG CTGCGCGGCT GGAAGCTGCT GCTCCTGCCG
GCGCTTCCGC TGCTGGTCTG GACGATGCTG CTGGCGCGGC ACTTTCCGCC CACGCACAAC
CTGGTCCGCG ACTTTCACCT GCACAGCATC TACTTCACCG TGTTCCTCTA CGGCTACTGG
ATGGGCGTGG ACACGGGCGT GTGGCGCGAA CTGGAACGCC TGCGGTGGGT GTCGCTGGCG
CTGGCCGCGG CGGCGATCAC CGCCTTCATC GTGCTGCGGC TCGGCGTCAA GGGCCCGCCC
TCCGGCGTAC CGATGGACGC CCTGCGCATG CTCTACCTGT GGCTGGCGGT CGCCACCATC
CTGGGCCACG GCCACCGCCA CCTGAACCGT CCGTGGCCCT GGCTGCGCTG GGCCAACGAG
TCGGTGTACC CGTGGTACGT GCTGCACCAG ACGCTGATCA TCGCGGGCGT TGCGCTGCTG
GCTCCGCTCG CGCTGGGGCC GGTGCTGGAG CCGGCCTTGC TGGTCGCGCT GACCATCGTG
GGCTGCTGGC TGCTCAACGA CGGGCTGATC CGCCGCTTCA ACGGGCTGCG GCCGCTGTTC
GGCCTCAAGC GCCGGCGCGC CAGCGCCAAG ACCGCAGTCA CTTTGCGGGC GGAGGCGCTT
CCACCGGAAC CAGGATGGCA GTCCCCGTCG CCACGAGCTT GA
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| Protein sequence | MSTTASTLPD RRHDIDALRA LAFLLVILYH VAMYYVADWP WHLKSPHAAE WLQWPMRMLN
LWRMDLVFLV SGVSLGFLSR SQGTWSLLRS RGVRLMLPLA FGMAVVVPYQ AYAQGVASGL
VAPGFGAFLL RYLSMGDPWP KAAFDGAEFG ITWNHLWYLP YLFSYTALIA LTLPLWRSPA
GQWMRRRFNG LRGWKLLLLP ALPLLVWTML LARHFPPTHN LVRDFHLHSI YFTVFLYGYW
MGVDTGVWRE LERLRWVSLA LAAAAITAFI VLRLGVKGPP SGVPMDALRM LYLWLAVATI
LGHGHRHLNR PWPWLRWANE SVYPWYVLHQ TLIIAGVALL APLALGPVLE PALLVALTIV
GCWLLNDGLI RRFNGLRPLF GLKRRRASAK TAVTLRAEAL PPEPGWQSPS PRA
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