| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3600 |
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| Symbol | |
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| ID | 7970675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3806474 |
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| End bp | 3807130 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794185 |
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| Product | Asp/Glu racemase |
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| Protein accession | YP_002945483 |
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| Protein GI | 239816573 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.374024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGCA TCGCACTGAT CCACGCGCTC TCGCACTCGG TTGCGCCCAT CAACGCCGCC
TTCGAGCGCG ACTGGCCCGA GGCCGTGCGC ATGAACCTGC TGGACGACAG CCTCTCGGCC
GACCTGGCGC GCGGCGGCAA AGGGCTCGAC GCGGCGATGC ACGAGCGCTT TCAGCGGCTC
GCGCAGTACG CGGTCGACAC GGGCGCCGAG GGCATCCTCT TCACCTGCTC GGCCTTCGGG
CCCTGCATCG AGGCCGTGGC GCAGCGGCAT GCGGGCATTC CGGTGCTCAA GCCCAACGAG
GCGATGGTGG CCGAGGCCGC GCAAGGGCAG CAGGGCCGCC TCGGCCTCAT CGCCACCTTC
GCGGCCACGC TGGTGTCGAT GCCGCCGGAG TTTCCGCCGG GCATCGCGCT CGAGCCCATG
CTGGCCGAAG GCGCGCTCGA CGCGCTGAAC GCCGGCGACA CGCAGCGGCA CGATGCGTTG
ATTGCCGCCC AGGCGGCGGC GCTGCGCGAG CGCGGCTGCA CGCGCATTGC GCTTGCGCAG
TTCAGCATGG CGCGCGCGCG TGCCGCCTGC GAAGCGGCCA GCGGCCTGCC GGTGCTCACC
ACCGTCGACA GCGCGGTACG GGCCCTGCGG CTGCGCACGA ATCGGGCTCT TCGATAA
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| Protein sequence | MTRIALIHAL SHSVAPINAA FERDWPEAVR MNLLDDSLSA DLARGGKGLD AAMHERFQRL
AQYAVDTGAE GILFTCSAFG PCIEAVAQRH AGIPVLKPNE AMVAEAAQGQ QGRLGLIATF
AATLVSMPPE FPPGIALEPM LAEGALDALN AGDTQRHDAL IAAQAAALRE RGCTRIALAQ
FSMARARAAC EAASGLPVLT TVDSAVRALR LRTNRALR
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