| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3597 |
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| Symbol | |
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| ID | 7970672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3803628 |
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| End bp | 3804599 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794182 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945480 |
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| Protein GI | 239816570 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACC GCCTTGTTCG GTGCCTTGCC GTTCTTTCCC TTGCTGCCGT GGCAACAAGT
GCCGGCGCCC AGACCTTTCC CGCCAAGCCG ATCCGCTGGC TCGTTCCGTA CGCGGCCGGC
GGCGGCTCCG ACTTTCTCGC GCGCACGGTG GCGCAGACGC TCTCCACCCA GGTGGGACAG
CCGGTGCTGG TGGACAACAA GCCCGGCGGC AACACCGCGC TGGCCGCGGC CGAGACGGCG
CGCGCGCCGG CCGACGGCTA CACGGTGCTG TCGGCCGACA ACGGCACGCT GGTGTTCAAT
CCGGCGCTCT ACAAGTCGCT CTCGTACAGC CCGACCAAGG ACCTGGCGCC CGTCACGCTG
ATGGGCAAGT TCCCGATGAT CCTGGTGGTC GGCGCCAATT CCGGCATCGC GACGGCCAAG
GATTTCATCG CCAGGGCCAA GGCCAAGCCG GGCGACGTGA GCTACGCCTC GGCCGGCGCC
GGCAGCCCGC ACCACCTGGC AATGGAACTG CTCAAGGTGG AGGCCGGCCT TTTCATGGTC
CATGTGCCGT ACCGCGGCGC GGCGCCGGCG CTGGCCGACG TGGTGGGAGG GCAGCTGCCG
GCCATGATGG TCGACCTGGC GGCCGGCGCC GGCTTCATCA AGGGCGGCAA GGTCCGCGCG
CTGGCGGTGG CCAACCCGAC GCGCCTGCCG CAGCTGCCCG ACGTGCCCAC CTTCGCCGAG
CTGGGCTACA AGAACGTCGA AGCCGCCGCG CTGGTCGGCG TGGTGGTGCC CTCGGCCACG
CCGACGGAGG TGGTGAACAC GCTCAACCGC CAGCTGGTGG CGGCCATCCA TGAGCCCTCG
GTGAACAAGC GCATGGTCGA CTTCGGCGTC GAGCCGGTCG GCAACACGCC CGCGCAGTAC
ACCGCGCTGC TGAAGGCCGA GACCGTGCGC TGGCACAAGC TGATCCGCGA TTTGAAGATC
ACGCTGGACT GA
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| Protein sequence | MKNRLVRCLA VLSLAAVATS AGAQTFPAKP IRWLVPYAAG GGSDFLARTV AQTLSTQVGQ
PVLVDNKPGG NTALAAAETA RAPADGYTVL SADNGTLVFN PALYKSLSYS PTKDLAPVTL
MGKFPMILVV GANSGIATAK DFIARAKAKP GDVSYASAGA GSPHHLAMEL LKVEAGLFMV
HVPYRGAAPA LADVVGGQLP AMMVDLAAGA GFIKGGKVRA LAVANPTRLP QLPDVPTFAE
LGYKNVEAAA LVGVVVPSAT PTEVVNTLNR QLVAAIHEPS VNKRMVDFGV EPVGNTPAQY
TALLKAETVR WHKLIRDLKI TLD
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