Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3581 |
Symbol | |
ID | 7970656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3782427 |
End bp | 3784700 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644794166 |
Product | hypothetical protein |
Protein accession | YP_002945464 |
Protein GI | 239816554 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.09299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGCAG CCTCGCTGCT GGCCGCGTGC GGAGGCGGCA GCCACGGCGC CGGACCGGCA GCCTTCCTGC CGCCGCCCGC GAACCAGGCC AGCAGCACCA CCTTCAGCGG CGTCCTCACG GCCAGCGCCT TCAAGCCCGG CAGCAGCACC GACCCGGTGG TCACGCCGGG CTACTACGCC GGCGCCACCG TCTGCGTGGA CAGCAACGGC AACGGCCGCT GCGACAGCGG CGAGCCGGCC GCGGTCACCG ATGCCAACGG CAAGTTCAGC CTGTCGCTGT CCGGCGCGTC GGCACTCATT GCCGACATCG GCACCAACGC CAGGAACACC GCGAGCAACA CCAACGTGGC CACGCGCGAA GTGCTGCGCG TCATGCTCGA CCAAGTGCAG GAACAGGGCA CGGCCGTGGT GGTCAGCCCG CTGTCCTCCG AAGTGGCGCG GCTGGTCGAG GCCAACGGCA CGAGCTATGC CGCCGAGAAG CAGAACCTGG CCGCGCGCCT GGGCGTGCCT GTCGGTTCCC TGCTCGGCGA CGTCAACGCC GCCAGCGGCG CCGTGCAGGC CGCCTTGCTC AATGAAGCCA ATGCGCTGAA CAACCGCTTC GCCTACGCCA CCACCAAGCT CGACCGCGGC GACAAGTTCC CCGACGCGCT GGCCAACCCC GGCGGCGATC CGCGCCTCGC AGGCATGGCC GGCGTGACCG CGGCCACGGC GAGCGTCGCG GACAACCGCA AGCCCATCAC CTTCCTGCAA TCGCAGCAGG CGGCGTTCAA TGTGGAGGGC ATTCCGCGCT ACGACAACAT CTTCATCGTG ATGCTCGAGA ACAAGGCCAC GATGTCGATC CTGAACTCGG CCTATGCGCC CAAGATCAAC GGCTACCTGA AGGCCGGCAA CCAGCTGGTG AGCTACTACG CCACCGGCAA CCCGAGCGAG CCCAACTACA CGGCCCTGGG CGGCGCCGAC GACTGGGGCA TCACGGACGA CAGCCAGTGG AACTGCGACG CCACCGGCGC CAACGCCGTG CAGGACCTGC CCGTGCCCGA CAACACCCAG CCGGGCCTGG CCAAGTCGCC CTTTGCAGCC ACCTGCACGC AGGCCGCCGC GGTGAACCAC AACATCGTCG GCAGGCCGAA CCTGTTCAAT GCGATCACCA ATGCCGGCCT GACCTGGCGC ACCTACAGCG AATCGATGAA CCCGGGCCAG GACTTCCGCA CCGACAGCGT GGCCGATGCC GCCGTCACCG CCAAGGACAA CGTCTACGCG CCGGGCACGC TGGGCGGCAA CACCACGGCC ATTGGCGACG CCACGCTCAC GCTGCCGCTG CCGGGCGGCC TGTACAAGAC CAAGCACCAC CCCGGCATGG CCTACCAGAA CGTGCGCAGC GCGCCCGAAT GGAAGTACAG CAACCGCACC ATGGGCGGCG GCCAGTGGGA CGCGGCGCTG AAGAACAGCA CCGACTACGC CATTCCCGCC AGCTACGACT ACGACCAGCT CGGCACCGAC CTGGCCAGCG GCAACGTCGG CAACCTGAAC TTCCTGGTGC CGGACCAGTG CGACGACATG CACGGCATCA GCGTGAAGGG CGCAGGCGGC GTCGGCACCG CGAGCGACTG CGCCAGCGTG GCCAACAACG TGTCGACCAG CGCCGTCTCG CCGATCATCA CGCGCGGCGA CAACTACGTC GACTACACGG TCAAGCGCAT CCAGGCTTCG CCGCTGTGGC AGAACCCGCA AAAGCGCGTG GCCATCGTGC TGATGTTCGA CGAGGGCAGC GCCACCAGCG GCTTCAACTC CTGCTGCGGC TGGAACGTGT CGAACAGCAC GGTCGCCAAT CCGGTCAAGC AGAACGCGGA CGGCAGCTGG TCGGTGGACG CGAGCATCAA CAACTACACC AAGGGCAACC GCGGCCACGG CGAGAGCATC TTCGGCATCC TGACCAACCA GGCTGGCGCG CCCAAGGGCG TGTCCGACAG CGATGCCTAC AGCCACTTCT CGTTCGTGCG CACGCTGCAG GACATGTTCC AGCTGGCCGA CCCGGCGGTC GACGGCACGT ACATGAACCG CTCGAAGTAC ACCGAGGCTT TCATCGCCCA GAACATCGTG AACCTGCCCG AATACGCAGG CAGCGCGGAC ACGCACTTCG ACAGCGTGCG GCCGATCAAC CATGCCTTCG TGATTCCGGC GGGCTACACG CAGAAGCAGT CGGGCGACGT GTCGACCACG GCGCAGGTCG GGCCGGACGC CAACCAGCTC AATGTCTGGT CGCTGAAGCA ATGA
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Protein sequence | MLAASLLAAC GGGSHGAGPA AFLPPPANQA SSTTFSGVLT ASAFKPGSST DPVVTPGYYA GATVCVDSNG NGRCDSGEPA AVTDANGKFS LSLSGASALI ADIGTNARNT ASNTNVATRE VLRVMLDQVQ EQGTAVVVSP LSSEVARLVE ANGTSYAAEK QNLAARLGVP VGSLLGDVNA ASGAVQAALL NEANALNNRF AYATTKLDRG DKFPDALANP GGDPRLAGMA GVTAATASVA DNRKPITFLQ SQQAAFNVEG IPRYDNIFIV MLENKATMSI LNSAYAPKIN GYLKAGNQLV SYYATGNPSE PNYTALGGAD DWGITDDSQW NCDATGANAV QDLPVPDNTQ PGLAKSPFAA TCTQAAAVNH NIVGRPNLFN AITNAGLTWR TYSESMNPGQ DFRTDSVADA AVTAKDNVYA PGTLGGNTTA IGDATLTLPL PGGLYKTKHH PGMAYQNVRS APEWKYSNRT MGGGQWDAAL KNSTDYAIPA SYDYDQLGTD LASGNVGNLN FLVPDQCDDM HGISVKGAGG VGTASDCASV ANNVSTSAVS PIITRGDNYV DYTVKRIQAS PLWQNPQKRV AIVLMFDEGS ATSGFNSCCG WNVSNSTVAN PVKQNADGSW SVDASINNYT KGNRGHGESI FGILTNQAGA PKGVSDSDAY SHFSFVRTLQ DMFQLADPAV DGTYMNRSKY TEAFIAQNIV NLPEYAGSAD THFDSVRPIN HAFVIPAGYT QKQSGDVSTT AQVGPDANQL NVWSLKQ
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