| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3570 |
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| Symbol | |
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| ID | 7970645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3769046 |
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| End bp | 3769669 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794155 |
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| Product | Lysine exporter protein (LYSE/YGGA) |
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| Protein accession | YP_002945453 |
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| Protein GI | 239816543 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.594028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTTT CTCTTTTCCT CAAGGCCCTG GTCATCGGGC TGTCGATCGC CGCACCCGTG
GGCCCCATCG GGCTGCTCTG CATCCAGCGC ACGCTCGCGC ACGGCCGTGC CATCGGTTTT
CTCAGCGGCC TCGGCGCCGC GCTGGCGGAT GCGTGCTACG GCGCCATTGG CGCGTTCGGC
GTGTCGGCGG TGATCTCGTC GATGGTGGCG GCGCGCGTGC CGCTGGCGCT CGGCGGCGCG
GCCTTCCTGG CATGGATGGG CGTGCAGCTG CTGCGTGCGC CGGCCGCCAC CCAGGCCCGC
GCCGCGCAGG ACGCTGCCAC GCCGCTGAAA GCCATGCTGT CGGTGTTCAT GCTCACGCTC
GCGAACCCGA TGACGATCCT GTCCTTCGTC GCGGTGTTCG CATCGATCGG CACCGGGCAT
GCGAGCAGCG GCAGCGGCGC TGCCGTGACG ATGGTGGCGG GCGTTTTCCT CGGGTCGGCG
ATATGGTGGC TGGGCCTGTC GACCGTGGTG TCGATGGTGC GGCACAGGCT CGGTGCGCAG
GTGCTCCAGT CCATCAACCG GCTGTCGGGC GCACTGCTGC TGGGCTTTGC GGTGTTTCAG
CTCTCGGCGC TGCTGTCGCG CTGA
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| Protein sequence | MDFSLFLKAL VIGLSIAAPV GPIGLLCIQR TLAHGRAIGF LSGLGAALAD ACYGAIGAFG
VSAVISSMVA ARVPLALGGA AFLAWMGVQL LRAPAATQAR AAQDAATPLK AMLSVFMLTL
ANPMTILSFV AVFASIGTGH ASSGSGAAVT MVAGVFLGSA IWWLGLSTVV SMVRHRLGAQ
VLQSINRLSG ALLLGFAVFQ LSALLSR
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